RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 ARFGEF3Q5TH69 2177 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 BTBD17A6NE02 478 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 FCGR3BO75015 233 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 S100A8P05109 93 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 ZNF83P51522 516 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 DEFB109BQ30KR1 87 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 TOLLIPQ9H0E2 274 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 PRO3102Q9H379 93 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 M0R296 226 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 CRYAAP02489 173 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 BCL2P10415 239 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 COL10A1Q03692 680 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 FOXF2Q12947 444 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 CATR1Q13166 79 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 RNF212Q495C1 297 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 FAM201AQ5SY85 155 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 SPNS3Q6ZMD2 512 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 OR10P1Q8NGE3 313 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 FAM210BQ96KR6 192 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 SNX22Q96L94 193 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 SH3BGRL2Q9UJC5 107 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 OPN1MWP04001 364 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 OPN1MW2P0DN77 364 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 OPN1MW3P0DN78 364 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 FABP4P15090 132 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 RTP5Q14D33 572 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 ZNF497Q6ZNH5 498 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 HAPLN4Q86UW8 402 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 MUCL1Q96DR8 90 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 PKIBQ9C010 78 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 OPN3Q9H1Y3 402 aaPredicted RBP10.88□□□□□ -0.67
USP11-204ENST00000377107 IFNA1P01562 189 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
USP11-204ENST00000377107 TAF15Q92804 592 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP11-204ENST00000377107 OTOGLQ3ZCN5 2332 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 DUXBA0A1W2PPF3 345 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 A0A1W2PPQ1 181 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 SPRY3O43610 288 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 LY86O95711 162 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
USP11-204ENST00000377107 TFF3Q07654 80 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 ELOBQ15370 118 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 HEPN1Q6WQI6 88 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 HEYLQ9NQ87 328 aaPredicted RBP10.88□□□□□ -0.67
USP11-204ENST00000377107 GSN-AS1Q9NRJ2 163 aa10.88□□□□□ -0.67
USP11-204ENST00000377107 LAMA5O15230 3695 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 ODAMA1E959 279 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 RNF212BA8MTL3 300 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 PTBP3O95758 552 aaKnown RBP10.87□□□□□ -0.67
USP11-204ENST00000377107 TNFRSF9Q07011 255 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 ZNF726P1Q15940 193 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 KHDC3LQ587J8 217 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 FAM214BQ7L5A3 538 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 OR10G4Q8NGN3 311 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 OR10G9Q8NGN4 311 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 OR10G7Q8NGN6 311 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 OR13A1Q8NGR1 328 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 DTD1Q8TEA8 209 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 LAMP3Q9UQV4 416 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 LOC102723971A0A1B0GUV8 181 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 PRAMEF5Q5TYX0 476 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 PEAR1Q5VY43 1037 aaPredicted RBP10.87□□□□□ -0.67
USP11-204ENST00000377107 Q8IYB0 196 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 Q8NFD4 153 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 GTF3AQ92664 365 aaKnown RBP10.87□□□□□ -0.67
USP11-204ENST00000377107 C11orf1Q9H5F2 150 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 PATZ1Q9HBE1 687 aaKnown RBP10.87□□□□□ -0.67
USP11-204ENST00000377107 KLF2Q9Y5W3 355 aaPredicted RBP10.87□□□□□ -0.67
USP11-204ENST00000377107 PCSK5Q92824 1860 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 C19orf67A6NJJ6 358 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 M0R1X1 148 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 PGA5P0DJD9 388 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 C1orf87Q8N0U7 546 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 ZNF295-AS1Q8N0V1 137 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 MDS2Q8NDY4 140 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 PFDN5Q99471 154 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
USP11-204ENST00000377107 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
USP11-204ENST00000377107 APC2O95996 2303 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 M0R1B8 84 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 UBE2CO00762 179 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 MLNRO43193 412 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 GPR12P47775 334 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 PSMB3P49720 205 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 GCSAMLQ5JQS6 135 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 NCR3LG1Q68D85 454 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 MOB1BQ7L9L4 216 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
USP11-204ENST00000377107 WDR61Q9GZS3 305 aaKnown RBP10.86□□□□□ -0.67
USP11-204ENST00000377107 GAR1Q9NY12 217 aaKnown RBP10.86□□□□□ -0.67
USP11-204ENST00000377107 PAGE4O60829 102 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 IGLV2-14P01704 120 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 FOLR2P14207 255 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 CHRNA7P36544 502 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms