RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 IGHV2-70P01814 119 aa21.24■□□□□ 0.99
C9orf40-201ENST00000376854 ZNF826PQ6ZT77 177 aa21.24■□□□□ 0.99
C9orf40-201ENST00000376854 KLF14Q8TD94 323 aaPredicted RBP21.24■□□□□ 0.99
C9orf40-201ENST00000376854 ZDHHC11Q9H8X9 412 aa21.24■□□□□ 0.99
C9orf40-201ENST00000376854 P0C879 139 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 PMP22Q01453 160 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 AESQ08117 197 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 OOEPA6NGQ2 149 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 LRRC30A6NM36 301 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 HBZP02008 142 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 CD55P08174 381 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 NKX6-1P78426 367 aaPredicted RBP21.23■□□□□ 0.99
C9orf40-201ENST00000376854 SLC35E4Q6ICL7 350 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 EDARADDQ8WWZ3 215 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 CLN8Q9UBY8 286 aa21.23■□□□□ 0.99
C9orf40-201ENST00000376854 TRAV20A0A0B4J274 112 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 S1PR2O95136 353 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 HOXA4Q00056 320 aaPredicted RBP21.22■□□□□ 0.99
C9orf40-201ENST00000376854 EIF4EBP1Q13541 118 aaPredicted RBP21.22■□□□□ 0.99
C9orf40-201ENST00000376854 WDR25Q64LD2 544 aaPredicted RBP21.22■□□□□ 0.99
C9orf40-201ENST00000376854 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.22■□□□□ 0.99
C9orf40-201ENST00000376854 SPENQ96T58 3664 aaKnown RBP21.22■□□□□ 0.99
C9orf40-201ENST00000376854 ODAMA1E959 279 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 CATR1Q13166 79 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 PMS2P11Q13670 270 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 CENPVQ7Z7K6 275 aaPredicted RBP21.22■□□□□ 0.99
C9orf40-201ENST00000376854 TMEM178AQ8NBL3 297 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 NINJ1Q92982 152 aa21.22■□□□□ 0.99
C9orf40-201ENST00000376854 SEC14L6B5MCN3 397 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 MLNRO43193 412 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 PYY3Q5JQD4 70 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 ACSM6Q6P461 480 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 SSX3Q99909 188 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 ZFHX4Q86UP3 3567 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 PLA2G5P39877 138 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 CD81P60033 236 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 INO80CQ6PI98 192 aaPredicted RBP21.21■□□□□ 0.99
C9orf40-201ENST00000376854 BTNL3Q6UXE8 466 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 C11orf53Q8IXP5 236 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 TMEM147Q9BVK8 224 aa21.21■□□□□ 0.99
C9orf40-201ENST00000376854 C17orf98A8MV24 154 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 TRGC1P0CF51 173 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 MEF2BQ02080 365 aaPredicted RBP21.2■□□□□ 0.98
C9orf40-201ENST00000376854 ATP6V1FQ16864 119 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 MRGPRDQ8TDS7 321 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 ABHD5Q8WTS1 349 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 COQ2Q96H96 371 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.2■□□□□ 0.98
C9orf40-201ENST00000376854 C1QTNF9BB2RNN3 333 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 PPP1R2P9O14990 202 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 HMGB3O15347 200 aaKnown RBP21.2■□□□□ 0.98
C9orf40-201ENST00000376854 OPN1MWP04001 364 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 TFF1P04155 84 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 OPN1MW2P0DN77 364 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 OPN1MW3P0DN78 364 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 GABRA2P47869 451 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 BRWD1-AS2P59051 145 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 SRSF6Q13247 344 aaKnown RBP21.2■□□□□ 0.98
C9orf40-201ENST00000376854 FRZBQ92765 325 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 SMIM7Q9BQ49 75 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 CTDSP1Q9GZU7 261 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 SLC25A22Q9H936 323 aa21.2■□□□□ 0.98
C9orf40-201ENST00000376854 CFAP47Q6ZTR5 3102 aa21.19■□□□□ 0.98
C9orf40-201ENST00000376854 KIAA2026Q5HYC2 2103 aa21.19■□□□□ 0.98
C9orf40-201ENST00000376854 GFI1BQ5VTD9 330 aa21.19■□□□□ 0.98
C9orf40-201ENST00000376854 Q6ZR03 302 aa21.19■□□□□ 0.98
C9orf40-201ENST00000376854 NAT8Q9UHE5 227 aa21.19■□□□□ 0.98
C9orf40-201ENST00000376854 TGOLN2O43493 480 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 ZG16O60844 167 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 FGF7P21781 194 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 ACP7Q6ZNF0 438 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 OR10P1Q8NGE3 313 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 DTD1Q8TEA8 209 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 CLCF1Q9UBD9 225 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 SOD3P08294 240 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 Q6ZT83 130 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 ZDHHC16Q969W1 377 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 TRIB1Q96RU8 372 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 AGMATQ9BSE5 352 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 CXXC4Q9H2H0 198 aa21.18■□□□□ 0.98
C9orf40-201ENST00000376854 TRBV24-1A0A075B6N3 115 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 PMS2P5A8MQ11 134 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 WISP2O76076 250 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 AGFG2O95081 481 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 ADIRFQ15847 76 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 PDZD11Q5EBL8 140 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 FAM214BQ7L5A3 538 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 HIST3H2BBQ8N257 126 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 OR10G9Q8NGN4 311 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 OR10G7Q8NGN6 311 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 OR10D4PQ8NGN7 298 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 CHD3Q12873 2000 aaKnown RBP21.17■□□□□ 0.98
C9orf40-201ENST00000376854 TTC28Q96AY4 2481 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 ELOA3CA0A087WX78 387 aaPredicted RBP21.17■□□□□ 0.98
C9orf40-201ENST00000376854 CTXND1A0A1B0GTU2 59 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 CLDN14O95500 239 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 PSMB3P49720 205 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 TLE1Q04724 770 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 FAM209BQ5JX69 171 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 PRAMEF6Q5VXH4 476 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms