RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PTPRQQ9UMZ3 2332 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 IGHV1-18A0A0C4DH31 117 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 A0A1B0GV50 99 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 MEX3AA1L020 520 aaKnown RBP10.25□□□□□ -0.77
UBR4-203ENST00000375225 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 LRRC30A6NM36 301 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 NDUFS6O75380 124 aaKnown RBP10.25□□□□□ -0.77
UBR4-203ENST00000375225 OR2C1O95371 312 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 CFHR2P36980 270 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 FABP6P51161 128 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 AKR1D1P51857 326 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 RUNX1Q01196 453 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 AESQ08117 197 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 HAGHQ16775 308 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 C1orf185Q5T7R7 199 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 LINC00518Q8N0U6 118 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 CISD2Q8N5K1 135 aaKnown RBP10.25□□□□□ -0.77
UBR4-203ENST00000375225 ZNF610Q8N9Z0 462 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 CLDND2Q8NHS1 167 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 FAM57AQ8TBR7 257 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 LRRC29Q8WV35 223 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 SNX22Q96L94 193 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 TCEAL7Q9BRU2 100 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 WDR61Q9GZS3 305 aaKnown RBP10.25□□□□□ -0.77
UBR4-203ENST00000375225 RBKSQ9H477 322 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 NCOR1P1Q9H4R4 102 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 JPT1Q9UK76 154 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 DOCK7Q96N67 2140 aa10.25□□□□□ -0.77
UBR4-203ENST00000375225 LOC102723971A0A1B0GUV8 181 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 MGST3O14880 152 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 PPIHO43447 177 aaKnown RBP10.24□□□□□ -0.77
UBR4-203ENST00000375225 CRYAAP02489 173 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 S100A8P05109 93 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 RAB5AP20339 215 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 PRDX2P32119 198 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 PMS2P11Q13670 270 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 PRAMEF6Q5VXH4 476 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 TMEM14EPQ6UXP3 125 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 Q6ZRM9 215 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 ZNF429Q86V71 674 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 ZNF808Q8N4W9 903 aaPredicted RBP10.24□□□□□ -0.77
UBR4-203ENST00000375225 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 Q8NA96 180 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 OR10P1Q8NGE3 313 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 OR52L2PQ8NGH6 319 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 MRGPRDQ8TDS7 321 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 STARD4Q96DR4 205 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 RARRES2Q99969 163 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 UFSP2Q9NUQ7 469 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 SLC25A15Q9Y619 301 aa10.24□□□□□ -0.77
UBR4-203ENST00000375225 H3BQ15 152 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 PRRG2O14669 202 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 WNT9BO14905 357 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 TGOLN2O43493 480 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 RBMXL2O75526 392 aaKnown RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 TNFSF13O75888 250 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 CGAP01215 116 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 BCL2P10415 239 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 SFTPCP11686 197 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 MAS1LP35410 378 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 GPR12P47775 334 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 CEBPDP49716 269 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 RAB7AP51149 207 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 TDGF1P3P51864 188 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 KLF3P57682 345 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 ERVK-16P61578 105 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 RBPJQ06330 500 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 EIF4EBP1Q13541 118 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 ICAM4Q14773 271 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 TMEM30BQ3MIR4 351 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 ZNF826PQ6ZT77 177 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 MRGPRGQ86SM5 289 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 OR2Z1Q8NG97 314 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBR4-203ENST00000375225 COQ2Q96H96 371 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 MRPL37Q9BZE1 423 aaKnown RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 OPN3Q9H1Y3 402 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 OR6C3Q9NZP0 311 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 VAX2Q9UIW0 290 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 ARID1AO14497 2285 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 GTF3C1Q12789 2109 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 SRRM5B3KS81 715 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 PTBP3O95758 552 aaKnown RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 KRASP01116 189 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 TNFSF4P23510 183 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 GLRXP35754 106 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 KLRB1Q12918 225 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 FOXF2Q12947 444 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 SP5Q6BEB4 398 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 GFRALQ6UXV0 394 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 Q6ZR03 302 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 CENPVQ7Z7K6 275 aaPredicted RBP10.23□□□□□ -0.77
UBR4-203ENST00000375225 C1QL4Q86Z23 238 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 UBALD1Q8TB05 177 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 DTD1Q8TEA8 209 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 ABHD14AQ9BUJ0 271 aa10.23□□□□□ -0.77
UBR4-203ENST00000375225 C20orf24Q9BUV8 137 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms