RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OR5D18Q8NGL1 313 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 GLYATL2Q8WU03 294 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 PIGCQ92535 297 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 CCL17Q92583 94 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM186Q96B77 213 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM56Q96MV1 263 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 MSL2Q9HCI7 577 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 FBXL17Q9UF56 701 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 IL19Q9UHD0 177 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 UBE2J1Q9Y385 318 aaPredicted RBP8.67□□□□□ -1.02
COL5A1-202ENST00000371820 WIPI2Q9Y4P8 454 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM56-RWDD3S4R434 201 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 TRBV6-6A0A0A6YYG2 114 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 MSGN1A6NI15 193 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 TRDCB7Z8K6 153 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 GPR31O00270 319 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 NUPL2O15504 423 aaKnown RBP8.66□□□□□ -1.02
COL5A1-202ENST00000371820 DFFBO76075 338 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 S100A8P05109 93 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 S100A9P06702 114 aaKnown RBP8.66□□□□□ -1.02
COL5A1-202ENST00000371820 SFTA3P0C7M3 94 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 PI3P19957 117 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 RBM11P57052 281 aaKnown RBP8.66□□□□□ -1.02
COL5A1-202ENST00000371820 SRSF2Q01130 221 aaKnown RBP8.66□□□□□ -1.02
COL5A1-202ENST00000371820 SNAI3Q3KNW1 292 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 Q6ZRG5 221 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 COLCA1Q6ZS62 124 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 OR2Z1Q8NG97 314 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 OR4A4PQ8NGN8 299 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 NPRL2Q8WTW4 380 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 ZNF665Q9H7R5 613 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 SLC2A9Q9NRM0 540 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 TREM2Q9NZC2 230 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 CACFD1Q9UGQ2 172 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 RNF150Q9ULK6 438 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 MPC1Q9Y5U8 109 aa8.66□□□□□ -1.02
COL5A1-202ENST00000371820 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 SCAF4O95104 1147 aaKnown RBP8.65□□□□□ -1.02
COL5A1-202ENST00000371820 PRH1P02810 166 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 DBHP09172 617 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 OR5AC1P0C628 307 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 NKX2-1P43699 371 aaPredicted RBP8.65□□□□□ -1.02
COL5A1-202ENST00000371820 FGF12P61328 243 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 LMO4P61968 165 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 GUK1Q16774 197 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 CEACAM21Q3KPI0 293 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 DMBX1Q8NFW5 382 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 OR10AD1Q8NGE0 317 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 TOMM40LQ969M1 308 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 RBMXL1Q96E39 390 aaKnown RBP8.65□□□□□ -1.02
COL5A1-202ENST00000371820 AKR1E2Q96JD6 320 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM222Q9H0R3 208 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 SLC35B3Q9H1N7 401 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM106BQ9NUM4 274 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 HIF1ANQ9NWT6 349 aa8.65□□□□□ -1.02
COL5A1-202ENST00000371820 TANC2Q9HCD6 1990 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 IQCF6A8MYZ5 107 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 FAM157AC9JC47 383 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 J3QLI3 93 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 TGOLN2O43493 480 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
COL5A1-202ENST00000371820 SCGB1D2O95969 90 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 PPYP01298 95 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 IGHV2-5P01817 119 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 S100A6P06703 90 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 MUC1P15941 1255 aaPredicted RBP8.64□□□□□ -1.03
COL5A1-202ENST00000371820 PRKACAP17612 351 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 VDAC1P21796 283 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 GATA3P23771 443 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 ACKR3P25106 362 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 CD80P33681 288 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 MDH2P40926 338 aaKnown RBP8.64□□□□□ -1.03
COL5A1-202ENST00000371820 CD200P41217 278 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 ARHGDIBP52566 201 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 TMEM155Q4W5P6 130 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 OR2T2Q6IF00 324 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 MRPL21Q7Z2W9 205 aaKnown RBP8.64□□□□□ -1.03
COL5A1-202ENST00000371820 RNF144BQ7Z419 303 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 ZNF573Q86YE8 665 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 FOXRED2Q8IWF2 684 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 Q8IYB0 196 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 ZDHHC23Q8IYP9 409 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 OR2C3Q8N628 320 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 OR4D5Q8NGN0 318 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 ITLN1Q8WWA0 313 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 OR2V2Q96R30 315 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 EIF5A2Q9GZV4 153 aaKnown RBP8.64□□□□□ -1.03
COL5A1-202ENST00000371820 SAV1Q9H4B6 383 aaPredicted RBP8.64□□□□□ -1.03
COL5A1-202ENST00000371820 LPAR2Q9HBW0 351 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 Q9N2K0 584 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 C19orf12Q9NSK7 152 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 PPP1R3CQ9UQK1 317 aa8.64□□□□□ -1.03
COL5A1-202ENST00000371820 A0A1B0GU03 582 aa8.63□□□□□ -1.03
COL5A1-202ENST00000371820 LRRC30A6NM36 301 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms