RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 FCN1O00602 326 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RRHO14718 337 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GALP22466 123 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RANBP1P43487 201 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 MOGAT2Q3SYC2 334 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ASPHD1Q5U4P2 390 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF660Q6AZW8 331 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GLDNQ6ZMI3 551 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 NR2C2APQ86WQ0 139 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CMSS1Q9BQ75 279 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SCOCQ9UIL1 159 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 NUBP2Q9Y5Y2 271 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TRDV1A0A1B0GX56 115 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 IFITM5A6NNB3 132 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB27BO00194 218 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SOX15O60248 233 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RBBP9O75884 186 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB9AP51151 201 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR10A3P58181 314 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CX3CL1P78423 397 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 HES5Q5TA89 166 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF383Q8NA42 475 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR11H1Q8NG94 326 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR5M8Q8NGP6 311 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 DPF1Q92782 380 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 FBXL15Q9H469 300 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 PARP11Q9NR21 331 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 KIAA1456Q9P272 454 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 BLOC1S6Q9UL45 172 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GAB2Q9UQC2 676 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 VSIG4Q9Y279 399 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 WASHC3Q9Y3C0 194 aa10.62□□□□□ -0.71
TNFRSF1A-202ENST00000366159 MFNGO00587 321 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 MRPS14O60783 128 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 DIRAS3O95661 229 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 IGKV1-16P04430 117 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 LINC00205P59089 165 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GABARAPL2P60520 117 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 DGCR2P98153 550 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 DEFB121Q5J5C9 76 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 UBE2UQ5VVX9 321 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 DRAXINQ8NBI3 349 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR4A4PQ8NGN8 299 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR10R2Q8NGX6 335 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CABLES2Q9BTV7 478 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RDH8Q9NYR8 311 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RNF150Q9ULK6 438 aa10.61□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TRBV6-7A0A0A0MS04 114 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 PDCD5O14737 125 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 HSPA12AO43301 675 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAMP3O60896 148 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 FCGR3AP08637 254 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB6AP20340 208 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 LUMP51884 338 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB25P57735 213 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GNB1P62873 340 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 PSG5Q15238 335 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SRSF7Q16629 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 C9orf66Q5T8R8 295 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB3CQ96E17 227 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TPSG1Q9NRR2 321 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 LSM4Q9Y4Z0 139 aaKnown RBP10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TENM3Q9P273 2699 aa10.6□□□□□ -0.71
TNFRSF1A-202ENST00000366159 FABP7O15540 132 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GSTP1P09211 210 aaKnown RBP10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CD3GP09693 182 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GSTT2P0CG29 244 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GSTT2BP0CG30 244 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 GNB3P16520 340 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB3BP20337 219 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 FGF9P31371 208 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SERPINB10P48595 397 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SSBP2P81877 361 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 AKIRIN2Q53H80 203 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 IGSF11Q5DX21 431 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 Q6ZS49 121 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 PDPNQ86YL7 162 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SPARTQ8N0X7 666 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TCTEX1D1Q8N7M0 179 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR1N2Q8NGR9 330 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF221Q9UK13 617 aa10.59□□□□□ -0.71
TNFRSF1A-202ENST00000366159 A0A0B4J203 849 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ERICH4A6NGS2 130 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 H7C2Y5 167 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SPDEFO95238 335 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ATP6V1G2O95670 118 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TFAP2AP05549 437 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CRYGBP07316 175 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR8U8P0C7N1 319 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 HIST1H1DP16402 221 aaKnown RBP10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF616Q08AN1 781 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 C22orf42Q6IC83 251 aa10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 C5orf30Q96GV9 206 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms