RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RGS8P57771 180 aaPredicted RBP3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 FGF12P61328 243 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ACTA2P62736 377 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ACTG2P63267 376 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ACTC1P68032 377 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ACTA1P68133 377 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 TNFAIP6P98066 277 aaPredicted RBP3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 RPL18Q07020 188 aaKnown RBP3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ENDOGQ14249 297 aaKnown RBP3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 PSG5Q15238 335 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 MOGQ16653 247 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC36A2Q495M3 483 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 TNFAIP8L3Q5GJ75 292 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 C10orf128Q5T292 105 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 FAM27BQ5VT28 67 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 HHATQ5VTY9 493 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 TMEM53Q6P2H8 277 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 SPICQ8N5J4 248 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 CCDC54Q8NEL0 328 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ZNF420Q8TAQ5 688 aaPredicted RBP3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC7A6Q92536 515 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 CMBLQ96DG6 245 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR2H1Q9GZK4 316 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 C1orf198Q9H425 327 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 ABCB10Q9NRK6 738 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 NUFIP1Q9UHK0 495 aaKnown RBP3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 GMEB1Q9Y692 573 aa3.73□□□□□ -1.81
RNU4-39P-201ENST00000362455 SERTM2A0A1B0GWG4 89 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 CPSF4LA6NMK7 179 aaKnown RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 F6UB75 175 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 M0QX08 132 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 PEX7O00628 323 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 KPNA4O00629 521 aaPredicted RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 MRPS12O15235 138 aaKnown RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 CHP2O43745 196 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 FARS2O95363 451 aaKnown RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 PTHP01270 115 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OPN1SWP03999 348 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 IGHV3-43DP0DP04 118 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 RRM2P31350 389 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 AQP2P41181 271 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 CDKN1BP46527 198 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 GDI2P50395 445 aaKnown RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 POLR2JP52435 117 aaKnown RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 CDK6Q00534 326 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 PRB3Q04118 309 aaPredicted RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 ECH1Q13011 328 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 STX3Q13277 289 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 GUCA2BQ16661 112 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 RSPO1Q2MKA7 263 aaPredicted RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 ZBED5Q49AG3 693 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 C2orf83Q53S99 150 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 REEP3Q6NUK4 255 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 LRRN1Q6UXK5 716 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 DPPA2Q7Z7J5 298 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 NKAIN4Q8IVV8 208 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 TMEM86BQ8N661 226 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 LRRC75AQ8NAA5 344 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 C19orf18Q8NEA5 215 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 NOXO1Q8NFA2 376 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR2Z1Q8NG97 314 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR10AD1Q8NGE0 317 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR4A4PQ8NGN8 299 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 PFN4Q8NHR9 129 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC7A13Q8TCU3 470 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR2V2Q96R30 315 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 ECSITQ9BQ95 431 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 TMEM109Q9BVC6 243 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OSBPL10Q9BXB5 764 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 GABARAPL3Q9BY60 117 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 C16orf95Q9H693 158 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 TMEM38AQ9H6F2 299 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 ARMC7Q9H6L4 198 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 GEMIN7Q9H840 131 aaKnown RBP3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 TMEM27Q9HBJ8 222 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLCO1B3Q9NPD5 702 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 VAPAQ9P0L0 249 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR5V1Q9UGF6 321 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 ING4Q9UNL4 249 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 SIGLEC9Q9Y336 463 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 DNAH1Q9P2D7 4330 aa3.72□□□□□ -1.81
RNU4-39P-201ENST00000362455 A0A0B4J2A0 478 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 ZNF816-ZNF321PA0A0X1KG74 233 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 H0Y9J4 135 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 H3BSA7 217 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 OR2F2O95006 317 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 CST2P09228 141 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 ANXA8P13928 327 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 IDO1P14902 403 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 GPX2P18283 190 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 CFHR2P36980 270 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 GZMMP51124 257 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 VSNL1P62760 191 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 ELF3P78545 371 aaPredicted RBP3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 FADDQ13158 208 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 MAB21L1Q13394 359 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 MPPED2Q15777 294 aa3.71□□□□□ -1.82
RNU4-39P-201ENST00000362455 ZNF404Q494X3 552 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms