RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OR10X1Q8NGY0 326 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 OR2T6Q8NHC8 308 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 NHSQ6T4R5 1651 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 DEFB133Q30KQ1 61 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 STRADBQ9C0K7 418 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 ELOVL5Q9NYP7 299 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 A0A096LPE4 126 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1W2PPZ6 126 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 OR2J3O76001 311 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 C20orf144Q9BQM9 153 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 SNHG12Q9BXW3 62 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 FAM206AQ9NX38 181 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 MT-CO3P00414 261 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 CXorf66Q5JRM2 361 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 DEFB132Q7Z7B7 95 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 CENPVL1A0A0U1RR11 272 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 MIC13Q5XKP0 118 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM211Q6ICI0 200 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF664Q8N3J9 261 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 MESP1Q9BRJ9 268 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 PLA2G3Q9NZ20 509 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 CNIH1O95406 144 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 DCAF10Q5QP82 559 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 UNQ5815/PRO19632Q6UWF5 114 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 TAAR3PQ9P1P4 343 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 MARF1Q9Y4F3 1742 aaKnown RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 UPK3AO75631 287 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 DUSP3P51452 185 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 RTP5Q14D33 572 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 OR4C3Q8NH37 302 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 VSTM2LQ96N03 204 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 HDHD3Q9BSH5 251 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 UBTD1Q9HAC8 227 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 TRAV9-1A0A075B6T8 112 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 A8MWP6 167 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 GCHFRP30047 84 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF260Q3ZCT1 412 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 SCN7AQ01118 1682 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 TRBV24-1A0A075B6N3 115 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 RPS15P62841 145 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF841Q6ZN19 808 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 MUC15Q8N387 334 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 K7N7A8 449 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 RPL7P18124 248 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 RELBQ01201 579 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 FAM169BQ8N8A8 192 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 SEMA5BQ9P283 1151 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 H0YIZ8 118 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 PSG2P11465 335 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ROM1Q03395 351 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 MRGPRDQ8TDS7 321 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 PTPRBP23467 1997 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1B0GWB2 263 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ORM1P02763 201 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 FTH1P19P0C7X4 201 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 FAM157BP0CG42 384 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 KIAA1644Q3SXP7 199 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 APOBEC4Q8WW27 367 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF414Q96IQ9 312 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 MRPL13Q9BYD1 178 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 SLC25A17O43808 307 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 EML2O95834 649 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 VMA21Q3ZAQ7 101 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF324BQ6AW86 544 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ABCA3Q99758 1704 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 LMX1BO60663 402 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 CA1P00915 261 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 IL4P05112 153 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ISG15P05161 165 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 RNASEH2CQ8TDP1 164 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 DUSP13Q9UII6 198 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ADCYAP1P18509 176 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 OR1D5P58170 312 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 SLC23A3Q6PIS1 610 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ST20Q9HBF5 79 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 C5orf49A4QMS7 147 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 NRG2O14511 850 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 CXCL1P09341 107 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 SPACA9Q96E40 222 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 HIST1H4GQ99525 98 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 GNB4Q9HAV0 340 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 TRAV1-1A0A0B4J248 108 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 TRAV38-1A0A0B4J264 116 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 CRYBA2P53672 197 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 HES1Q14469 280 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 LSM10Q969L4 123 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
VPS13B-203ENST00000358544 OR2H1Q9GZK4 316 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 JKAMPQ9P055 326 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 SEC11AP67812 179 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 PQLC2Q6ZP29 291 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 PNKDQ8N490 385 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 ABHD3Q8WU67 409 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 CLN8Q9UBY8 286 aa5.28□□□□□ -1.56
VPS13B-203ENST00000358544 FAM181BA6NEQ2 426 aa5.27□□□□□ -1.57
VPS13B-203ENST00000358544 ARL14EPLP0DKL9 152 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms