RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 OR5R1Q8NH85 324 aa14.36□□□□□ -0.11
PDLIM7-202ENST00000355841 CAPSLQ8WWF8 208 aa14.36□□□□□ -0.11
PDLIM7-202ENST00000355841 CFHR4Q92496 578 aa14.36□□□□□ -0.11
PDLIM7-202ENST00000355841 C5orf30Q96GV9 206 aa14.36□□□□□ -0.11
PDLIM7-202ENST00000355841 RNASE1P07998 156 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 BRS3P32247 399 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 DYNLT3P51808 116 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 ARHGDIBP52566 201 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 FXYD4P59646 89 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 DYRK1AQ13627 763 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 HNF4GQ14541 408 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 GLDNQ6ZMI3 551 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 TMEM86BQ8N661 226 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 OR4D10Q8NGI6 311 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 TINAGL1Q9GZM7 467 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 RABL2AQ9UBK7 228 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 RABL2BQ9UNT1 228 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 TCF19Q9Y242 345 aa14.35□□□□□ -0.11
PDLIM7-202ENST00000355841 FAM181BA6NEQ2 426 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 TRIM77I1YAP6 450 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 GPR137BO60478 399 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 PPYP01298 95 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 SNRNP70P08621 437 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 ETV6P41212 452 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 LUMP51884 338 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 OXA1LQ15070 435 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 MFSD4AQ8N468 514 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 S1PR3Q99500 378 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 ZNF2Q9BSG1 426 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 SDHAF2Q9NX18 166 aa14.34□□□□□ -0.11
PDLIM7-202ENST00000355841 A6NDX4 124 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 M0R1X1 148 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 GSTZ1O43708 216 aaPredicted RBP14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 CHST1O43916 411 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 IGKV1D-33P01593 117 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 IGKV1-33P01594 117 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 CT45A6P0DMU7 189 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 CT45A5P0DMU8 189 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 CT45A7P0DMV0 189 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 HES1Q14469 280 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 TRIM16LQ309B1 348 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 FAAP20Q6NZ36 180 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 Q8N402 240 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 SECTM1Q8WVN6 248 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 NABP2Q9BQ15 211 aa14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 THAP7Q9BT49 309 aaPredicted RBP14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 RBMX2Q9Y388 322 aaKnown RBP14.33□□□□□ -0.11
PDLIM7-202ENST00000355841 TSPAN5P62079 268 aa14.33□□□□□ -0.12
PDLIM7-202ENST00000355841 KRTAP24-1Q3LI83 254 aa14.33□□□□□ -0.12
PDLIM7-202ENST00000355841 DHRS11Q6UWP2 260 aa14.33□□□□□ -0.12
PDLIM7-202ENST00000355841 TMEM17Q86X19 198 aa14.33□□□□□ -0.12
PDLIM7-202ENST00000355841 GIMAP1Q8WWP7 306 aa14.33□□□□□ -0.12
PDLIM7-202ENST00000355841 FAM90A9PA6NNJ1 464 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 TXNL1O43396 289 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 IGLV2-14P01704 120 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 FAM106CPP0CH98 169 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 HABP2Q14520 560 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 RNASE10Q5GAN6 216 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 TMEM229BQ8NBD8 167 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 GPHA2Q96T91 129 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 SRRQ9GZT4 340 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 GHITMQ9H3K2 345 aa14.32□□□□□ -0.12
PDLIM7-202ENST00000355841 CD40LGP29965 261 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 TAS2R19P59542 299 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 HERV-K104P61576 105 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 STEAP1BQ6NZ63 245 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 ZNF645Q8N7E2 425 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 OR6F1Q8NGZ6 308 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 FAM216AQ8WUB2 273 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 CCL28Q9NRJ3 127 aa14.31□□□□□ -0.12
PDLIM7-202ENST00000355841 RAB3DO95716 219 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 PTBP1P26599 531 aaKnown RBP eCLIP14.3□□□□□ -0.125e-12■■■■■ 40.8
PDLIM7-202ENST00000355841 SSBP1Q04837 148 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 ACTBL2Q562R1 376 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 VAX1Q5SQQ9 334 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 FAM71F2Q6NXP2 309 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 ZNF383Q8NA42 475 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 TRIM63Q969Q1 353 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 SDHCQ99643 169 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 SLC5A7Q9GZV3 580 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 CD74P04233 296 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 IFNA6P05013 189 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 CSF1P09603 554 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 TMEM11P17152 192 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 CD1BP29016 333 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 MOB3AQ96BX8 217 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 EAF1Q96JC9 268 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 RITA1Q96K30 269 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 PITPNC1Q9UKF7 332 aa14.3□□□□□ -0.12
PDLIM7-202ENST00000355841 ANKRD20A5PA0PJZ0 165 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 OR5H14A6NHG9 310 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 H0YJW9 148 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 TNFSF12O43508 249 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 PPP5CP53041 499 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 RELBQ01201 579 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 BAK1Q16611 211 aa14.29□□□□□ -0.12
PDLIM7-202ENST00000355841 DHRS7BQ6IAN0 325 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms