RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SMDT1Q9H4I9 107 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 RPS10P5Q9NQ39 176 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 OR2S2Q9NQN1 319 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 MBNL3Q9NUK0 354 aaKnown RBP12.2□□□□□ -0.46
CXCL12-201ENST00000343575 OR5AC2Q9NZP5 309 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 TRAV20A0A0B4J274 112 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 MSGN1A6NI15 193 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 FBP1P09467 338 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 MRPS11P82912 194 aaKnown RBP12.19□□□□□ -0.46
CXCL12-201ENST00000343575 SLC35E4Q6ICL7 350 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 OR5H2Q8NGV7 314 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 PSMG3-AS1Q96PY0 264 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 C5orf66Q9H5L9 145 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 PLEKHA2Q9HB19 425 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 DSCAML1Q8TD84 2053 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 AP4M1O00189 453 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 IFNA17P01571 189 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 DAOP14920 347 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 RAB5AP20339 215 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 PPT1P50897 306 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 FABP9Q0Z7S8 132 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 CHRFAM7AQ494W8 412 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 UBAC2Q8NBM4 344 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 TMEM230Q96A57 120 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 DCTN5Q9BTE1 182 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 ZNF665Q9H7R5 613 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 ZNF286AQ9HBT8 521 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
CXCL12-201ENST00000343575 FSTL3O95633 263 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 TSPAN15O95858 294 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 HKR1P10072 659 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 RAB32Q13637 225 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 KRBOX4Q5JUW0 171 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 AADACL3Q5VUY0 350 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 RPL7L1Q6DKI1 246 aaKnown RBP12.18□□□□□ -0.46
CXCL12-201ENST00000343575 ZNF600Q6ZNG1 722 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 NRGNQ92686 78 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 EHFQ9NZC4 300 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 DMRT1Q9Y5R6 373 aa12.18□□□□□ -0.46
CXCL12-201ENST00000343575 A0A1B0GW64 132 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 TMEM30CPA0ZSE6 113 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 K7EPK0 472 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 MGST3O14880 152 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 TMPRSS2O15393 492 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 Q6ZRG5 221 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 LFNGQ8NES3 379 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 AKR1E2Q96JD6 320 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 ARV1Q9H2C2 271 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 KAAG1Q9UBP8 84 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
CXCL12-201ENST00000343575 PTPN13Q12923 2485 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 KCNAB3O43448 404 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 OR5H8P0DN80 308 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 RPL12P30050 165 aaKnown RBP12.17□□□□□ -0.46
CXCL12-201ENST00000343575 RAB2AP61019 212 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 EDDM3AQ14507 147 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 SLC9A3R2Q15599 337 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 RBMS3Q6XE24 437 aaKnown RBP12.17□□□□□ -0.46
CXCL12-201ENST00000343575 RTBDNQ9BSG5 229 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-201ENST00000343575 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
CXCL12-201ENST00000343575 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
CXCL12-201ENST00000343575 TACC2O95359 2948 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 H7C1Q1 480 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 ADAP1O75689 374 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 SNCAP37840 140 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 NPY4RP50391 375 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 EFNA4P52798 201 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 SSTP61278 116 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
CXCL12-201ENST00000343575 HLA-DRB3P79483 266 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 ANKRD55Q3KP44 614 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 DNLZQ5SXM8 178 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 TCF23Q7RTU1 214 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 UBALD1Q8TB05 177 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 NECAP2Q9NVZ3 263 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 CELSR2Q9HCU4 2923 aa12.16□□□□□ -0.46
CXCL12-201ENST00000343575 ARID1AO14497 2285 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 ODAMA1E959 279 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 ZNF729A6NN14 1252 aaPredicted RBP12.15□□□□□ -0.46
CXCL12-201ENST00000343575 C12orf77C9JDV5 145 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 IFNA2P01563 188 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 IFNA21P01568 189 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 CGB3P0DN86 165 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 CGB7P0DN87 165 aa12.15□□□□□ -0.46
CXCL12-201ENST00000343575 KIR2DS4P43632 304 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms