RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 PRNTQ86SH4 94 aa14□□□□□ -0.17
RTL6-201ENST00000341255 TAF15Q92804 592 aaKnown RBP eCLIP14□□□□□ -0.17
RTL6-201ENST00000341255 SNRNP40Q96DI7 357 aaKnown RBP14□□□□□ -0.17
RTL6-201ENST00000341255 ATG101Q9BSB4 218 aa14□□□□□ -0.17
RTL6-201ENST00000341255 FAM206AQ9NX38 181 aa14□□□□□ -0.17
RTL6-201ENST00000341255 TRBV23-1A0A0A0MS06 115 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 MPTX1A8MV57 137 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 PRR33A8MZF0 331 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 PGLYRP1O75594 196 aaPredicted RBP13.99□□□□□ -0.17
RTL6-201ENST00000341255 SMIM10L1P0DMW3 83 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 GBGT1Q8N5D6 347 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 SAP25Q8TEE9 199 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 TMEM171Q8WVE6 324 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 SMIM10Q96HG1 83 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 POLR2AP24928 1970 aaKnown RBP13.99□□□□□ -0.17
RTL6-201ENST00000341255 HBZP02008 142 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 FTH1P19P0C7X4 201 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 SPATA45Q537H7 98 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 SELENOHQ8IZQ5 122 aaKnown RBP13.99□□□□□ -0.17
RTL6-201ENST00000341255 APCDD1LQ8NCL9 501 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 GPR146Q96CH1 333 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 SHISA3A0PJX4 238 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 LHFPL6Q9Y693 200 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 LOC389332A0A1B0GUA5 103 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 HINT1P49773 126 aaPredicted RBP13.99□□□□□ -0.17
RTL6-201ENST00000341255 STARD6P59095 220 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 HIST1H2BAQ96A08 127 aa13.99□□□□□ -0.17
RTL6-201ENST00000341255 COL5A3P25940 1745 aaPredicted RBP13.99□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A10PA6NDY2 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A18PA6NE21 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A16PA6NEW6 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A20PA6NIJ5 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A8PA6NJQ4 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A7PA6NKC0 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A22PA8MWA6 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A12PA8MX19 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A5PA8MXJ8 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A23PA8MXZ1 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A15PP0C7V4 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A13PP0C7W8 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A14PP0C7W9 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FAM90A24PP0C7X0 464 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 ZNF714Q96N38 554 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 GPR6P46095 362 aaPredicted RBP13.98□□□□□ -0.17
RTL6-201ENST00000341255 CTHRC1Q96CG8 243 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 MT-ND6P03923 174 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 FHITP49789 147 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 IBA57Q5T440 356 aaKnown RBP13.98□□□□□ -0.17
RTL6-201ENST00000341255 MYOZ3Q8TDC0 251 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 P2RX4Q99571 388 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 OPN3Q9H1Y3 402 aaPredicted RBP13.98□□□□□ -0.17
RTL6-201ENST00000341255 G6PC2Q9NQR9 355 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 OR4C46A6NHA9 309 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 CDX1P47902 265 aaPredicted RBP13.98□□□□□ -0.17
RTL6-201ENST00000341255 NMUP48645 174 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 RIPPLY2Q5TAB7 128 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 DNASE2BQ8WZ79 361 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 SHANK3Q9BYB0 1731 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 PLXNB2O15031 1838 aa13.98□□□□□ -0.17
RTL6-201ENST00000341255 OR2H2O95918 312 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 DANCRP0C864 163 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 ZP1P60852 638 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 LINC01590Q5TEZ4 76 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 CCL13Q99616 98 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 CD74P04233 296 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 MPV17P39210 176 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 OR4A47Q6IF82 309 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 ZNF738Q8NE65 137 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 ZFP30Q9Y2G7 519 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 NKX2-8O15522 239 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 MGPP08493 103 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 CLDN18P56856 261 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 SLC25A33Q9BSK2 321 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 PILRBQ9UKJ0 227 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 HIGD1AQ9Y241 93 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 IGKV1D-42A0A075B6H8 117 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 MPDU1O75352 247 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 ERVFRD-1P60508 538 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 SNAI3Q3KNW1 292 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 MUC15Q8N387 334 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 GCSAMQ8N6F7 178 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 TP53RKQ96S44 253 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 CISD1Q9NZ45 108 aaKnown RBP13.97□□□□□ -0.17
RTL6-201ENST00000341255 FHL5Q5TD97 284 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 ZNF645Q8N7E2 425 aa13.97□□□□□ -0.17
RTL6-201ENST00000341255 FBLL1A6NHQ2 334 aaKnown RBP13.96□□□□□ -0.17
RTL6-201ENST00000341255 H3BVH4 76 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 SIAH2O43255 324 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 FGFRL1Q8N441 504 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 CXorf65A6NEN9 183 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 K7ERU9 68 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 HOXB1P14653 301 aaPredicted RBP13.96□□□□□ -0.17
RTL6-201ENST00000341255 ECSCRQ19T08 205 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 SCARF2Q96GP6 870 aaPredicted RBP13.96□□□□□ -0.17
RTL6-201ENST00000341255 MRPL18Q9H0U6 180 aaKnown RBP13.96□□□□□ -0.17
RTL6-201ENST00000341255 IGKV3-7A0A075B6H7 116 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 HYPMO75409 117 aa13.96□□□□□ -0.17
RTL6-201ENST00000341255 CA2P00918 260 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms