RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RPL39P5Q59GN2 51 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 VAX1Q5SQQ9 334 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 Q8N402 240 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 OR56B4Q8NH76 319 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 BORCS5Q969J3 196 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 CHIAQ9BZP6 476 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 OR2D2Q9H210 308 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 PTTG2Q9NZH5 202 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 TCF19Q9Y242 345 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 RBMX2Q9Y388 322 aaKnown RBP9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 V9GYH0 126 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 ANK3Q12955 4377 aaKnown RBP9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 A6NDX4 124 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 FAM90A9PA6NNJ1 464 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 M0R1X1 148 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 GPR137BO60478 399 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 RAB3DO95716 219 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 PPYP01298 95 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 CD3DP04234 171 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 CD24P25063 80 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 RPL15P61313 204 aaKnown RBP9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 TAGLNQ01995 201 aaKnown RBP9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 HABP2Q14520 560 aaPredicted RBP9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 MEF2DQ14814 521 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 STEAP1BQ6NZ63 245 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 LPCAT3Q6P1A2 487 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF645Q8N7E2 425 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 GDPD1Q8N9F7 314 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 OR2T10Q8NGZ9 312 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 TMEM158Q8WZ71 300 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 CFHR4Q92496 578 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 ADTRPQ96IZ2 230 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 AKR1E2Q96JD6 320 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 NABP2Q9BQ15 211 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF251Q9BRH9 671 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF2Q9BSG1 426 aaPredicted RBP9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 SLC5A7Q9GZV3 580 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 SDHAF2Q9NX18 166 aa9.57□□□□□ -0.88
SPTLC1-202ENST00000337841 SETD2Q9BYW2 2564 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 IGHV3-72A0A0B4J1Y9 119 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 DISC1C4P0D8 188 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 M0QYG6 137 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 MOSP00540 346 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 CD74P04233 296 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 SNRNP70P08621 437 aaKnown RBP9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 AKAIN1P0CW23 69 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 CT45A6P0DMU7 189 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 CT45A5P0DMU8 189 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 CT45A7P0DMV0 189 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 TMEM11P17152 192 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 INPP1P49441 399 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 THBS3P49746 956 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 FXYD4P59646 89 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 AP3S2P59780 193 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 SRSF2Q01130 221 aaKnown RBP9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 HNF4GQ14541 408 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 MSMO1Q15800 293 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 C16orf82Q7Z2V1 217 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 ARRDC1Q8N5I2 433 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 ZBTB34Q8NCN2 500 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 SECTM1Q8WVN6 248 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 S100ZQ8WXG8 99 aa9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 MRPL20Q9BYC9 149 aaKnown RBP9.56□□□□□ -0.88
SPTLC1-202ENST00000337841 IGKV1D-13A0A0B4J2D9 117 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 ANKRD20A5PA0PJZ0 165 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 OR5H14A6NHG9 310 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 H7C2Y5 167 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 M0QZK8 103 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 PROP1O75360 226 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 APOA2P02652 100 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 IGKV1-13P0DP09 117 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 S100GP29377 79 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 CBX3Q13185 183 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 LSAMPQ13449 338 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 EBI3Q14213 229 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF79Q15937 498 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF660Q6AZW8 331 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 DHRS7BQ6IAN0 325 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 TMEM219Q86XT9 240 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 TOMM5Q8N4H5 51 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 DRAXINQ8NBI3 349 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 MOB3AQ96BX8 217 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 RBM14Q96PK6 669 aaKnown RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 HSD17B10Q99714 261 aaKnown RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 TINAGL1Q9GZM7 467 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 SRRQ9GZT4 340 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 CCL28Q9NRJ3 127 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 C1RLQ9NZP8 487 aa9.55□□□□□ -0.88
SPTLC1-202ENST00000337841 JMJD1CQ15652 2540 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 OR2F2O95006 317 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 AMY2AP04746 511 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 RRASP10301 218 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 FAUP35544 74 aaKnown RBP9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 TRIQKQ629K1 86 aa9.54□□□□□ -0.88
SPTLC1-202ENST00000337841 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms