RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
COL4A6-201ENST00000334504 INSIG2Q9Y5U4 225 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 IGKV3D-15A0A087WSY6 115 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 IGKV3-15P01624 115 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 CTSSP25774 331 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 GZMMP51124 257 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 ATRAIDQ6UW56 229 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 SYT8Q8NBV8 401 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 SPSB4Q96A44 273 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 DMRTA2Q96SC8 542 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 PSG6Q00889 435 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 MBNL2Q5VZF2 373 aaKnown RBP8.5□□□□□ -1.05
COL4A6-201ENST00000334504 WDYHV1Q96HA8 205 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 IGHV5-51A0A0C4DH38 117 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 ECSCRQ19T08 205 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 TTC9CQ8N5M4 171 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 GPR35Q9HC97 309 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 A6NNC1 897 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 F2RL2O00254 374 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 CD1AP06126 327 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 GPR3P46089 330 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 SCNM1Q9BWG6 230 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 VCX2Q9H322 139 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 LAMTOR2Q9Y2Q5 125 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 DSPPQ9NZW4 1301 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 A8MXK9 166 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 K7EQS6 105 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 LIPFP07098 398 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 CKS1BP61024 79 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 MYO5AQ9Y4I1 1855 aaKnown RBP8.49□□□□□ -1.05
COL4A6-201ENST00000334504 TRAV8-2A0A0B4J237 113 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 ERGP11308 486 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 EGR1P18146 543 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 HYAL1Q12794 435 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 VN1R4Q7Z5H5 301 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 FOXC2Q99958 501 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 MOB4Q9Y3A3 225 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 SPTY2D1-AS1A0A0U1RR47 76 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-201ENST00000334504 SCTP09683 121 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 SRD5A2P31213 254 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 RPS11P62280 158 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL4A6-201ENST00000334504 FUT5Q11128 374 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 TMEM240Q5SV17 173 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 SLC25A38Q96DW6 304 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 C18orf15Q96N68 181 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 OR11H12B2RN74 326 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 GABRG2P18507 467 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 TMEM196Q5HYL7 178 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 TCF24Q7RTU0 167 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 OR11H1Q8NG94 326 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 OR11H2Q8NH07 326 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 OR13C6PQ8NH95 151 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 NRTNQ99748 197 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 CDX4O14627 284 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-201ENST00000334504 PGLYRP1O75594 196 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-201ENST00000334504 ZAR1Q86SH2 424 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 OR10J6PQ8NGY7 276 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 AQP3Q92482 292 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
COL4A6-201ENST00000334504 FGF5P12034 268 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 CX3CL1P78423 397 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 ISXQ2M1V0 245 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 BHLHA15Q7RTS1 189 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF645Q8N7E2 425 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 RNF7Q9UBF6 113 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 KIAA0100Q14667 2235 aaKnown RBP8.48□□□□□ -1.05
COL4A6-201ENST00000334504 ECM29Q5VYK3 1845 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 A0A1W2PQD3 144 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 ASAH2BP0C7U1 165 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-201ENST00000334504 RPS20P60866 119 aaKnown RBP8.48□□□□□ -1.05
COL4A6-201ENST00000334504 HBBP68871 147 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 TMEM108Q6UXF1 575 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 NEUROG1Q92886 237 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 C16orf92Q96LL3 132 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 SPSB2Q99619 263 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 ELOVL5Q9NYP7 299 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 CCL27Q9Y4X3 112 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 A0A1W2PP11 408 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 DLL1O00548 723 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 LDLRAD2Q5SZI1 272 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 C11orf68Q9H3H3 251 aaKnown RBP8.48□□□□□ -1.05
COL4A6-201ENST00000334504 WDR54Q9H977 334 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 FSTP19883 344 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 LCN2P80188 198 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 P2RY6Q15077 328 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 GPHA2Q96T91 129 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 C5orf66Q9H5L9 145 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 IGKV3D-11A0A0A0MRZ8 115 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 RRHO14718 337 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 C1QCP02747 245 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 IGKV3-11P04433 115 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 CENPWQ5EE01 88 aa8.48□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF764Q96H86 408 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-201ENST00000334504 KLF4O43474 513 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 CA11O75493 328 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms