RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 FAM90A22PA8MWA6 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 TNFSF10P50591 281 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 LINC01551Q86U37 167 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 KIR2DL5AQ8N109 375 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 WDYHV1Q96HA8 205 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 TECTBQ96PL2 329 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 VPS13AQ96RL7 3174 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 TRAV38-1A0A0B4J264 116 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 SSR4P51571 173 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 WIPI1Q5MNZ9 446 aaPredicted RBP12.42□□□□□ -0.42
COL6A2-202ENST00000310645 ZDHHC16Q969W1 377 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 HSPB9Q9BQS6 159 aa12.42□□□□□ -0.42
COL6A2-202ENST00000310645 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
COL6A2-202ENST00000310645 TYMSP04818 313 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 CBLN1P23435 193 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 RPL15P61313 204 aaKnown RBP12.41□□□□□ -0.42
COL6A2-202ENST00000310645 SRYQ05066 204 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 OR10D3Q8NH80 312 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 FAM103A1Q9BTL3 118 aaKnown RBP12.41□□□□□ -0.42
COL6A2-202ENST00000310645 DLL3Q9NYJ7 618 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 CBY1Q9Y3M2 126 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 ZNF716A6NP11 495 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 DEGS1O15121 323 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 RHBDL1O75783 438 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 IGLV2-14P01704 120 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 CDKN1AP38936 164 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 GTF3C1Q12789 2109 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 PCOLCEQ15113 449 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 CEACAM21Q3KPI0 293 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 NUFIP2Q7Z417 695 aaKnown RBP12.41□□□□□ -0.42
COL6A2-202ENST00000310645 OR10P1Q8NGE3 313 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 C1QTNF5Q9BXJ0 243 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 PPIAL4AQ9Y536 164 aa12.41□□□□□ -0.42
COL6A2-202ENST00000310645 RAMP3O60896 148 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 GNB1P62873 340 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 ARF1P84077 181 aaKnown RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 ACSF3Q4G176 576 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 FAM53AQ6NSI3 398 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 Q6ZWC4 215 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 SF3B5Q9BWJ5 86 aaKnown RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 TMEM106BQ9NUM4 274 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 OCIAD1Q9NX40 245 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 DNAJC13O75165 2243 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 ZG16O60844 167 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 CBR3O75828 277 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 EDDM3BP56851 147 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 RPS19BP1Q86WX3 136 aaKnown RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 FAM58AQ8N1B3 248 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 REPIN1Q9BWE0 567 aaKnown RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 GJE1A6NN92 205 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 RFPL3SP0C7P2 107 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 CDC34P49427 236 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 CCL7P80098 99 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 LCN2P80188 198 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 DRAM1Q8N682 238 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 OR5A2Q8NGI9 324 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 PRRG4Q9BZD6 226 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 RIMS4Q9H426 269 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-202ENST00000310645 LPAR2Q9HBW0 351 aa12.4□□□□□ -0.42
COL6A2-202ENST00000310645 MDFIC2A0A1B0GVS7 189 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 M0QZK8 103 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 KITLGP21583 273 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 TMEM14EPQ6UXP3 125 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 BAGE2Q86Y30 109 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 Q8NFD4 153 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 A0A1W2PQM1 296 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL6A2-202ENST00000310645 TCF21O43680 179 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 SERPINA7P05543 415 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 SOX8P57073 446 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 SRSF7Q16629 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL6A2-202ENST00000310645 TRIM61Q5EBN2 209 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 VAMP8Q9BV40 100 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 FSCN3Q9NQT6 498 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 MED12LQ86YW9 2145 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 SERF1AO75920 110 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 VENTXO95231 258 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 LTBRP36941 435 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 SPSB4Q96A44 273 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 MIEN1Q9BRT3 115 aa12.39□□□□□ -0.43
COL6A2-202ENST00000310645 OPN3Q9H1Y3 402 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms