RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 BAGE2Q86Y30 109 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 RPP25LQ8N5L8 163 aaKnown RBP13.8□□□□□ -0.2
CCDC8-201ENST00000307522 OR2Y1Q8NGV0 311 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 PYGO2Q9BRQ0 406 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 TP53TG3Q9ULZ0 132 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 ANKRD11Q6UB99 2663 aaPredicted RBP13.8□□□□□ -0.2
CCDC8-201ENST00000307522 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 PINLYPA6NC86 204 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 SSR4P51571 173 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 SLC23A3Q6PIS1 610 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 APH1AQ96BI3 265 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 TAAR3PQ9P1P4 343 aa13.8□□□□□ -0.2
CCDC8-201ENST00000307522 LOC105371242A0A075B767 164 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 SCTP09683 121 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 SLC35B1P78383 322 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 IL11RAQ14626 422 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 OR8G5Q8NG78 346 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 SGMS2Q8NHU3 365 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
CCDC8-201ENST00000307522 PMCHP20382 165 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 LINC00310P59036 64 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 Q6ZRM9 215 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.79□□□□□ -0.2
CCDC8-201ENST00000307522 ZNF295-AS1Q8N0V1 137 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 ST3GAL6Q9Y274 331 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 TRAV39A0A0B4J263 110 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 C9orf172C9J069 976 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 DUSP3P51452 185 aaPredicted RBP13.79□□□□□ -0.2
CCDC8-201ENST00000307522 MRGPRGQ86SM5 289 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 DEPPQ9NTK1 212 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 FBXL7Q9UJT9 491 aa13.79□□□□□ -0.2
CCDC8-201ENST00000307522 SERPINA7P05543 415 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 IFI6P09912 130 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 LRTM2Q8N967 370 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 CCDC71LQ8N9Z2 235 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 OIT3Q8WWZ8 545 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 MOB3AQ96BX8 217 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 IMMP1LQ96LU5 166 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 ZNF552Q9H707 407 aaPredicted RBP13.78□□□□□ -0.2
CCDC8-201ENST00000307522 ALKBH4Q9NXW9 302 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 IGKV1-12A0A0C4DH73 117 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 SPAARA0A1B0GVQ0 90 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 IGKV1D-12P01611 117 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 ECI1P42126 302 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
CCDC8-201ENST00000307522 PPP1R32Q7Z5V6 425 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 PROK2Q9HC23 129 aa13.78□□□□□ -0.2
CCDC8-201ENST00000307522 A0A0J9YW62 118 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 NKX6-3A6NJ46 265 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 SIRPB1O00241 398 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 CDX4O14627 284 aaPredicted RBP13.77□□□□□ -0.2
CCDC8-201ENST00000307522 CRYABP02511 175 aaKnown RBP13.77□□□□□ -0.2
CCDC8-201ENST00000307522 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 ST8SIA1Q92185 356 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 PSMF1Q92530 271 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 TECTBQ96PL2 329 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 OR4C12Q96R67 309 aa13.77□□□□□ -0.2
CCDC8-201ENST00000307522 PNRC2Q9NPJ4 139 aaKnown RBP13.77□□□□□ -0.2
CCDC8-201ENST00000307522 KIAA1324LA8MWY0 1029 aaPredicted RBP13.77□□□□□ -0.21
CCDC8-201ENST00000307522 TMEM11P17152 192 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 NPPCP23582 126 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 DTYMKP23919 212 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 HNRNPA3P51991 378 aaKnown RBP13.77□□□□□ -0.21
CCDC8-201ENST00000307522 SPINK9Q5DT21 86 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 HAPLN4Q86UW8 402 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 Q8NFD4 153 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 SSC4DQ8WTU2 575 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 DECR2Q9NUI1 292 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 USF3Q68DE3 2245 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 ADAMTS20P59510 1910 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 SLC17A3O00476 420 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 CXCL13O43927 109 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 SELENOTP62341 195 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 LDLRAD2Q5SZI1 272 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 ASPHD1Q5U4P2 390 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 ST6GALNAC6Q969X2 333 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 SGCZQ96LD1 299 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 SRXN1Q9BYN0 137 aa13.77□□□□□ -0.21
CCDC8-201ENST00000307522 ZZEF1O43149 2961 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 IGF2RP11717 2491 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 NAPSAO96009 420 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 NTF4P34130 210 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 PPP1CBP62140 327 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 KCNMB1Q16558 191 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 C6orf15Q6UXA7 325 aaPredicted RBP13.76□□□□□ -0.21
CCDC8-201ENST00000307522 GAL3ST2Q9H3Q3 398 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 IL36RNQ9UBH0 155 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 ZIC3O60481 467 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 YPEL1O60688 119 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 TNFSF15O95150 251 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 GDF1P27539 372 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 NPBWR2P48146 333 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 PSMB3P49720 205 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 RPL15P61313 204 aaKnown RBP13.76□□□□□ -0.21
CCDC8-201ENST00000307522 LCN12Q6JVE5 192 aa13.76□□□□□ -0.21
CCDC8-201ENST00000307522 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms