RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 MMP24Q9Y5R2 645 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 WSB1Q9Y6I7 421 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 MAP1LC3B2A6NCE7 125 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 TRGV3P03979 118 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 PRB3Q04118 309 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 CYB5R2Q6BCY4 276 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 ACP7Q6ZNF0 438 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 LYZL2Q7Z4W2 148 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 SLC24A4Q8NFF2 622 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 OR52M1Q8NGK5 317 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 MAP1LC3BQ9GZQ8 125 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 LYNX1G3V0Z9 82 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 SNCGO76070 127 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 LYNX1P0DP58 116 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 MFAP4P55083 255 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 DSCR9P59020 149 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 SURF2Q15527 256 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 SAXO1Q8IYX7 474 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 C5orf17Q8NAS9 161 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 TMEM186Q96B77 213 aa9.14□□□□□ -0.95
SYNPO2-201ENST00000307142 A0A0G2JNJ9 132 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 TRIM77I1YAP6 450 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 IGKV1D-33P01593 117 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 IGKV1-33P01594 117 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 FA2HQ7L5A8 372 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 ZCCHC24Q8N2G6 241 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 SLIRPQ9GZT3 109 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 AICDAQ9GZX7 198 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 Q9UFV3 132 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 CRYBA2P53672 197 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 IL24Q13007 206 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 COLCA1Q6ZS62 124 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 HOGA1Q86XE5 327 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 RHOFQ9HBH0 211 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 ARID1AO14497 2285 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 TCAPO15273 167 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 INHBBP09529 407 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 RCC1P18754 421 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 RAB5AP20339 215 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 SSTR5P35346 364 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 C11orf42Q8N5U0 333 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 MRPL24Q96A35 216 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 NBL1P41271 181 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 AMTP48728 403 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 CTDSPLO15194 276 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 CST4P01036 141 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 SLC6A1P30531 599 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 UBE2V2Q15819 145 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 DDB2Q92466 427 aa9.13□□□□□ -0.95
SYNPO2-201ENST00000307142 IGKV3D-15A0A087WSY6 115 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 PRSS23O95084 383 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 IGKV3-15P01624 115 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 IGHV3-23P01764 117 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 CADM3Q8N126 398 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 MPC2O95563 127 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 TIMP3P35625 211 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 WDFY2Q96P53 400 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 MRPL37Q9BZE1 423 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 PROB1E7EW31 1015 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 CORTO00230 105 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 PRNTQ86SH4 94 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 VKORC1L1Q8N0U8 176 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 OR2A4O95047 310 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 GZMKP49863 264 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 DNM1P46Q6ZS02 220 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 OR2A7Q96R45 310 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 SOSTQ9BQB4 213 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 J3QW42 95 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 HYPMO75409 117 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 USF1P22415 310 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 PSG7Q13046 419 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 OR10Z1Q8NGY1 313 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 NOTCH4Q99466 2003 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 KIAA1324LA8MWY0 1029 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 Q0VFX4 171 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 RAX2Q96IS3 184 aa9.12□□□□□ -0.95
SYNPO2-201ENST00000307142 NPIPB11E5RHQ5 1161 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 FCGR2BP31994 310 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 P2RY1P47900 373 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 LURAP1Q96LR2 239 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 IGHV1-18A0A0C4DH31 117 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 FSTP19883 344 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 STPG3Q8N7X2 389 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 SIGLECL1Q8N7X8 197 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 ZNF837Q96EG3 531 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 DPM3Q9P2X0 92 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 FREM3P0C091 2139 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 KCNAB3O43448 404 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 GATCO43716 136 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 RHBDL1O75783 438 aa9.11□□□□□ -0.95
SYNPO2-201ENST00000307142 B2MP61769 119 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms