RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 RAB11BQ15907 218 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 SPANXN2Q5MJ10 180 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 AP3S1Q92572 193 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 RAX2Q96IS3 184 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 KCTD7Q96MP8 289 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 GFI1Q99684 422 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 SLC23A1Q9UHI7 598 aa14.3□□□□□ -0.12
TMEM88-201ENST00000301599 SAA2-SAA4A0A096LPE2 208 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 ITGB1BP1O14713 200 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 NBR2O15453 112 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 SAA2P0DJI9 122 aaPredicted RBP14.29□□□□□ -0.12
TMEM88-201ENST00000301599 SLC2A2P11168 524 aaPredicted RBP14.29□□□□□ -0.12
TMEM88-201ENST00000301599 CEACAM6P40199 344 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 ETV6P41212 452 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 DEFA1P59665 94 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 DEFA3P59666 94 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 C2orf76Q3KRA6 126 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 LIN54Q6MZP7 749 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 FAM71F2Q6NXP2 309 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 LCNL1Q6ZST4 164 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 NPBQ8NG41 125 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 OR8U1Q8NH10 309 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 IFI27L2Q9H2X8 130 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 AK3Q9UIJ7 227 aa14.29□□□□□ -0.12
TMEM88-201ENST00000301599 ST8SIA5O15466 376 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 HLA-DRB1P01911 266 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 ZBTB25P24278 435 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 MC5RP33032 325 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 VEGFCP49767 419 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 TMEM50BP56557 158 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 FABP5Q01469 135 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 TMEM65Q6PI78 240 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 CENPSQ8N2Z9 138 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 FAM3DQ96BQ1 224 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 DUX3Q96PT4 197 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 CCDC32Q9BV29 185 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 OR51J1Q9H342 316 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 KIAA1456Q9P272 454 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 V9GY05 133 aa14.28□□□□□ -0.12
TMEM88-201ENST00000301599 WI2-2373I1.2A0A1W2PRP0 233 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 FOXI3A8MTJ6 420 aaPredicted RBP14.27□□□□□ -0.13
TMEM88-201ENST00000301599 HSPA12AO43301 675 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 CNTFRP26992 372 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 PSMB8P28062 276 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 RAB25P57735 213 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 C5orf64Q2M2E5 130 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 MFSD4AQ8N468 514 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 DRAXINQ8NBI3 349 aaPredicted RBP14.27□□□□□ -0.13
TMEM88-201ENST00000301599 OR56B1Q8NGI3 324 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 EDARADDQ8WWZ3 215 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 PECRQ9BY49 303 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 C6orf62Q9GZU0 229 aaPredicted RBP14.27□□□□□ -0.13
TMEM88-201ENST00000301599 OR51E2Q9H255 320 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 Q9N2K0 584 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 DAPK2Q9UIK4 370 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 WSB1Q9Y6I7 421 aa14.27□□□□□ -0.13
TMEM88-201ENST00000301599 DNAH3Q8TD57 4116 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 J3QRK9 145 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 CT45A6P0DMU7 189 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 CT45A5P0DMU8 189 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 CT45A7P0DMV0 189 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 PPIFP30405 207 aaKnown RBP14.26□□□□□ -0.13
TMEM88-201ENST00000301599 FGF9P31371 208 aaPredicted RBP14.26□□□□□ -0.13
TMEM88-201ENST00000301599 CLDN12P56749 244 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 OXA1LQ15070 435 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 RPL39P5Q59GN2 51 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 OR5M8Q8NGP6 311 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 C4orf3Q8WVX3 66 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 ARHGAP5-AS1Q96IT6 56 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 ABHD14BQ96IU4 210 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 CMSS1Q9BQ75 279 aaKnown RBP14.26□□□□□ -0.13
TMEM88-201ENST00000301599 AGMATQ9BSE5 352 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 HDHD3Q9BSH5 251 aaPredicted RBP14.26□□□□□ -0.13
TMEM88-201ENST00000301599 C11orf54Q9H0W9 315 aaPredicted RBP14.26□□□□□ -0.13
TMEM88-201ENST00000301599 C12orf4Q9NQ89 552 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 RAB22AQ9UL26 194 aa14.26□□□□□ -0.13
TMEM88-201ENST00000301599 IGHV7-81A0A0B4J1V7 117 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 OR5H14A6NHG9 310 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 PDCD5O14737 125 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 UPK1BO75841 260 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 NDUFA3O95167 84 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 SCTP09683 121 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 HLA-DRB3P79483 266 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 SSX1Q16384 188 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 DEFB136Q30KP8 78 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 FAM131AQ6UXB0 335 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 PTX4Q96A99 478 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 UBE2E2Q96LR5 201 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 RNF5Q99942 180 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 PARP11Q9NR21 331 aa14.25□□□□□ -0.13
TMEM88-201ENST00000301599 TRAV1-2A0A0B4J238 106 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 TRAV41A0A0B4J266 112 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 G3V318 75 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 H7C2Y5 167 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 LDLRAD4O15165 306 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 ATP6V0E1O15342 81 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 RBBP9O75884 186 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 IGLV1-40P01703 118 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 APOA1P02647 267 aa14.24□□□□□ -0.13
TMEM88-201ENST00000301599 GSTP1P09211 210 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms