RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
TFF3-201ENST00000291525 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
TFF3-201ENST00000291525 CD200R1LQ6Q8B3 271 aa13.46□□□□□ -0.25
TFF3-201ENST00000291525 GLDNQ6ZMI3 551 aaPredicted RBP13.46□□□□□ -0.25
TFF3-201ENST00000291525 DCUN1D4Q92564 292 aa13.46□□□□□ -0.25
TFF3-201ENST00000291525 TSNAXQ99598 290 aaKnown RBP13.46□□□□□ -0.25
TFF3-201ENST00000291525 CMSS1Q9BQ75 279 aaKnown RBP13.46□□□□□ -0.25
TFF3-201ENST00000291525 C11orf54Q9H0W9 315 aaPredicted RBP13.46□□□□□ -0.25
TFF3-201ENST00000291525 METTL1Q9UBP6 276 aaKnown RBP13.46□□□□□ -0.25
TFF3-201ENST00000291525 SMAD5-AS1Q9Y6J3 95 aa13.46□□□□□ -0.25
TFF3-201ENST00000291525 SORL1Q92673 2214 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 ARPC1BO15143 372 aaKnown RBP13.45□□□□□ -0.26
TFF3-201ENST00000291525 RGS10O43665 173 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 SAP30O75446 220 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 PSMD7P51665 324 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 TPBGQ13641 420 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 AKIRIN2Q53H80 203 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 ACTBL2Q562R1 376 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 UNQ5815/PRO19632Q6UWF5 114 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 OR56B1Q8NGI3 324 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 PTX4Q96A99 478 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 AGMATQ9BSE5 352 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
TFF3-201ENST00000291525 TOLLIPQ9H0E2 274 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 PARP12Q9H0J9 701 aaKnown RBP13.45□□□□□ -0.26
TFF3-201ENST00000291525 Q9N2K0 584 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 OR1A1Q9P1Q5 309 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 AK6Q9Y3D8 172 aaKnown RBP13.45□□□□□ -0.26
TFF3-201ENST00000291525 FBXO7Q9Y3I1 522 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 NUBP2Q9Y5Y2 271 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 DNAH9Q9NYC9 4486 aa13.45□□□□□ -0.26
TFF3-201ENST00000291525 VEGFCP49767 419 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 RPS25P62851 125 aaKnown RBP13.44□□□□□ -0.26
TFF3-201ENST00000291525 MLLT11Q13015 90 aaPredicted RBP13.44□□□□□ -0.26
TFF3-201ENST00000291525 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 TMEM91Q6ZNR0 172 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 PDPNQ86YL7 162 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
TFF3-201ENST00000291525 ARHGAP5-AS1Q96IT6 56 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 PECRQ9BY49 303 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 SLA2Q9H6Q3 261 aa13.44□□□□□ -0.26
TFF3-201ENST00000291525 SOX15O60248 233 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 TFAP2AP05549 437 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 SCTP09683 121 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 CALRP27797 417 aaKnown RBP13.43□□□□□ -0.26
TFF3-201ENST00000291525 SERPINB10P48595 397 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 AQP4P55087 323 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 RPS16P62249 146 aaKnown RBP13.43□□□□□ -0.26
TFF3-201ENST00000291525 PSG5Q15238 335 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.43□□□□□ -0.26
TFF3-201ENST00000291525 DLX4Q92988 240 aaPredicted RBP13.43□□□□□ -0.26
TFF3-201ENST00000291525 FAM3DQ96BQ1 224 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 CLCC1Q96S66 551 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 GFI1Q99684 422 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 CCDC90BQ9GZT6 254 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 ALX4Q9H161 411 aaPredicted RBP13.43□□□□□ -0.26
TFF3-201ENST00000291525 DUSP21Q9H596 190 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 ACOT13Q9NPJ3 140 aa13.43□□□□□ -0.26
TFF3-201ENST00000291525 FOXI3A8MTJ6 420 aaPredicted RBP13.42□□□□□ -0.26
TFF3-201ENST00000291525 TRDCB7Z8K6 153 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 FCN1O00602 326 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 DENRO43583 198 aaKnown RBP13.42□□□□□ -0.26
TFF3-201ENST00000291525 CA2P00918 260 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 HSPB1P04792 205 aaKnown RBP13.42□□□□□ -0.26
TFF3-201ENST00000291525 OR8U9P0C7N5 309 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 SLURP1P55000 103 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 TMEM50BP56557 158 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 TPPP2P59282 170 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 PITPNAQ00169 270 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 CBX3Q13185 183 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 OR4A4PQ8NGN8 299 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 ASCL2Q99929 193 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 RDH8Q9NYR8 311 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 V9GY05 133 aa13.42□□□□□ -0.26
TFF3-201ENST00000291525 IGHV4OR15-8A0A075B7B6 117 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 A0A087WW49 117 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 CD3GP09693 182 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 EGR2P11161 476 aaPredicted RBP13.41□□□□□ -0.26
TFF3-201ENST00000291525 CLDN12P56749 244 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 C2orf76Q3KRA6 126 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 ACSM6Q6P461 480 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 PRSS48Q7RTY5 328 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 DRAXINQ8NBI3 349 aaPredicted RBP13.41□□□□□ -0.26
TFF3-201ENST00000291525 LFNGQ8NES3 379 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 CASTOR1Q8WTX7 329 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 OR4C12Q96R67 309 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
TFF3-201ENST00000291525 VCX3BQ9H321 246 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 SLC35D1Q9NTN3 355 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 RAB22AQ9UL26 194 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 GAB2Q9UQC2 676 aa13.41□□□□□ -0.26
TFF3-201ENST00000291525 TENM3Q9P273 2699 aa13.4□□□□□ -0.26
TFF3-201ENST00000291525 H3BUA1 57 aa13.4□□□□□ -0.26
TFF3-201ENST00000291525 M0R1X1 148 aa13.4□□□□□ -0.26
TFF3-201ENST00000291525 PDCD5O14737 125 aa13.4□□□□□ -0.26
TFF3-201ENST00000291525 IGHV3-11P01762 117 aa13.4□□□□□ -0.26
TFF3-201ENST00000291525 TRGV3P03979 118 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms