RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MMP24Q9Y5R2 645 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 SVEP1Q4LDE5 3571 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 OR5H14A6NHG9 310 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 ITGB1BP1O14713 200 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 TUSC2O75896 110 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 PMP2P02689 132 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 OR5H8P0DN80 308 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 HLA-DMAP28067 261 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 FCGR2CP31995 323 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 ACTBP60709 375 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 HERV-K104P61576 105 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 SRSF7Q16629 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
CD44-204ENST00000279452 OR2B11Q5JQS5 317 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 LY6G6FQ5SQ64 297 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 HIST2H2BDQ6DRA6 164 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 FAM71F2Q6NXP2 309 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 C11orf88Q6PI97 169 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 Q6ZS46 218 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 Q6ZS49 121 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 SLC35E3Q7Z769 313 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 CENPVQ7Z7K6 275 aaPredicted RBP5.21□□□□□ -1.58
CD44-204ENST00000279452 TMEM17Q86X19 198 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 HOGA1Q86XE5 327 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 FOXRED2Q8IWF2 684 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 H1FOOQ8IZA3 346 aaPredicted RBP5.21□□□□□ -1.58
CD44-204ENST00000279452 C5orf56Q8N8D9 126 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 OR8H1Q8NGG4 311 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 OR5H2Q8NGV7 314 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 MCFD2Q8NI22 146 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 DYNC2LI1Q8TCX1 351 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 ABHD5Q8WTS1 349 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 SECTM1Q8WVN6 248 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 CMTM3Q96MX0 182 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 GHITMQ9H3K2 345 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 SLC35D1Q9NTN3 355 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 SDHAF2Q9NX18 166 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 EHFQ9NZC4 300 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 RSL24D1Q9UHA3 163 aaKnown RBP5.21□□□□□ -1.58
CD44-204ENST00000279452 OR2W1Q9Y3N9 320 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 CEPT1Q9Y6K0 416 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 CUBNO60494 3623 aa5.21□□□□□ -1.58
CD44-204ENST00000279452 JMJD1CQ15652 2540 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 FAM90A9PA6NNJ1 464 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 H0YJW9 148 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CTDSP2O14595 271 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 NBR2O15453 112 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 FGF16O43320 207 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 TNFSF12O43508 249 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 FBXO24O75426 580 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CT45A6P0DMU7 189 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CT45A5P0DMU8 189 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CT45A7P0DMV0 189 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 AADACP22760 399 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CNTFRP26992 372 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 MC5RP33032 325 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 RCVRNP35243 200 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 THBS3P49746 956 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 F2RL1P55085 397 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 PROK1P58294 105 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 LINC00205P59089 165 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 TAS2R46P59540 309 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 TSPAN5P62079 268 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 RPS16P62249 146 aaKnown RBP5.2□□□□□ -1.58
CD44-204ENST00000279452 IL18Q14116 193 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CDK10Q15131 360 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 RTL8BQ17RB0 113 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 KCTD9Q7L273 389 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 ZNF645Q8N7E2 425 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.2□□□□□ -1.58
CD44-204ENST00000279452 OR5AP2Q8NGF4 316 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 OR4X2Q8NGF9 303 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 SNAPC3Q92966 411 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 DIRAS2Q96HU8 199 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 CLCC1Q96S66 551 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 AGMATQ9BSE5 352 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 SCPEP1Q9HB40 452 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 LIN7CQ9NUP9 197 aaKnown RBP5.2□□□□□ -1.58
CD44-204ENST00000279452 TAS2R8Q9NYW2 309 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 ZNF107Q9UII5 783 aaPredicted RBP5.2□□□□□ -1.58
CD44-204ENST00000279452 LINC00527Q9UJ94 153 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 DSCAML1Q8TD84 2053 aa5.2□□□□□ -1.58
CD44-204ENST00000279452 IGKV1D-13A0A0B4J2D9 117 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 A0A1W2PRX2 142 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 M0QZ24 198 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 SHOXO15266 292 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 KCNAB3O43448 404 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 PPYP01298 95 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 HLA-DQB1P01920 261 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 AMY1AP04745 511 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 AMY2AP04746 511 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 IFNA6P05013 189 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 IGKV1-13P0DP09 117 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 VDAC1P21796 283 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 S100A5P33763 92 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 HRH1P35367 487 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 RFX2P48378 723 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 KRTAP10-3P60369 221 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 GNB1P62873 340 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 SLC35B1P78383 322 aa5.19□□□□□ -1.58
CD44-204ENST00000279452 EBI3Q14213 229 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms