RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 RIPPLY3P57055 190 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 Q6ZWC4 215 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 ANKRD30BLA7E2S9 258 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 RELBQ01201 579 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 ZP4Q12836 540 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 TIGITQ495A1 244 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 DNLZQ5SXM8 178 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 Q6ZRM9 215 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 HIPK2Q9H2X6 1198 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 LIN7CQ9NUP9 197 aaKnown RBP13.91□□□□□ -0.18
GPC1-201ENST00000264039 C19orf25Q9UFG5 118 aaPredicted RBP13.91□□□□□ -0.18
GPC1-201ENST00000264039 CLDN16Q9Y5I7 305 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 RNF212BA8MTL3 300 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 TOX3O15405 576 aaPredicted RBP13.91□□□□□ -0.18
GPC1-201ENST00000264039 SNAI2O43623 268 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 DRD1P21728 446 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 IGLV3-21P80748 117 aaPredicted RBP13.91□□□□□ -0.18
GPC1-201ENST00000264039 IGFBP7Q16270 282 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 ACTL10Q5JWF8 245 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 NHLRC2Q8NBF2 726 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 APOBEC3DQ96AK3 386 aaPredicted RBP13.91□□□□□ -0.18
GPC1-201ENST00000264039 TMEM147Q9BVK8 224 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 ENY2Q9NPA8 101 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 IL23AQ9NPF7 189 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 OR2W1Q9Y3N9 320 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 DPRXA6NFQ7 191 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 M0R2Z0 102 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 EFNA2O43921 213 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 CD99P14209 185 aa13.91□□□□□ -0.18
GPC1-201ENST00000264039 NXPH2O95156 264 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 MRPS11P82912 194 aaKnown RBP13.9□□□□□ -0.18
GPC1-201ENST00000264039 PRDX4Q13162 271 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 NRN1Q9NPD7 142 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 COL4A6Q14031 1691 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 F2Z2F3 143 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 ZG16O60844 167 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 LRRC75BQ2VPJ9 315 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 KIAA0895LQ68EN5 471 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 PLPPR1Q8TBJ4 325 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 WNT5BQ9H1J7 359 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 AKAP6Q13023 2319 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 A0A0U1RQV5 110 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 EDDM3AQ14507 147 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 CXorf67Q86X51 503 aaPredicted RBP13.9□□□□□ -0.18
GPC1-201ENST00000264039 TAAR3PQ9P1P4 343 aa13.9□□□□□ -0.18
GPC1-201ENST00000264039 UCP1P25874 307 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 SOX8P57073 446 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 RPEL1Q2QD12 228 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 FGFRL1Q8N441 504 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 LRTM2Q8N967 370 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 CPT1CQ8TCG5 803 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 MRPL13Q9BYD1 178 aaKnown RBP13.89□□□□□ -0.19
GPC1-201ENST00000264039 IGHMP01871 453 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 PLPPR5Q32ZL2 321 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 PRAMEF5Q5TYX0 476 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 PRAMEF6Q5VXH4 476 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 DOLPP1Q86YN1 238 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 FOXB1Q99853 325 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 SCO2A0A1W2PP80 73 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 H0Y980 276 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 SCRG1O75711 98 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 CATR1Q13166 79 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 GABRA6Q16445 453 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 RNF2Q99496 336 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
GPC1-201ENST00000264039 CCL25O15444 150 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 SYNGR1O43759 233 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 TMEM11P17152 192 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 MT-CO2P00403 227 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 IGKV1D-33P01593 117 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 IGKV1-33P01594 117 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 CLPSP04118 112 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 GABRG2P18507 467 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 EN2P19622 333 aaPredicted RBP13.88□□□□□ -0.19
GPC1-201ENST00000264039 KLF3P57682 345 aaPredicted RBP13.88□□□□□ -0.19
GPC1-201ENST00000264039 FBLN7Q53RD9 439 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 Q6ZS52 159 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 OR2Y1Q8NGV0 311 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 SSBP3Q9BWW4 388 aaPredicted RBP13.88□□□□□ -0.19
GPC1-201ENST00000264039 MRPL33O75394 65 aaKnown RBP13.88□□□□□ -0.19
GPC1-201ENST00000264039 UQCRFS1P47985 274 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 OR2M3Q8NG83 312 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 GABRG3Q99928 467 aa13.88□□□□□ -0.19
GPC1-201ENST00000264039 TNFRSF4P43489 277 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 GNG4P50150 75 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 OR4P4Q8NGL7 312 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 OR4A16Q8NH70 328 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 BCL2L2Q92843 193 aaPredicted RBP13.87□□□□□ -0.19
GPC1-201ENST00000264039 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 QTRT1Q9BXR0 403 aaKnown RBP13.87□□□□□ -0.19
GPC1-201ENST00000264039 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 PIGBOS1A0A0B4J2F0 54 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 TOX4O94842 621 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 CSN3P07498 182 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 ARL14EPLP0DKL9 152 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 RAB31Q13636 194 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms