RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 KIF26BQ2KJY2 2108 aa9.91□□□□□ -0.82
PTPN4-201ENST00000263708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 OR4C45A6NMZ5 311 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 LEUTXA8MZ59 168 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 INTS1Q8N201 2190 aaKnown RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 PQLC2Q6ZP29 291 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 A0A1W2PQM1 296 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 NDUFB4O95168 129 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 FXYD3Q14802 87 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 C19orf48Q6RUI8 117 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 LINC00299Q6ZSB3 139 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 ATOH7Q8N100 152 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 PLA2G2FQ9BZM2 168 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 PARLQ9H300 379 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 RBKSQ9H477 322 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 CRYBB2P43320 205 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 OR10AG1Q8NH19 301 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 IGF2P01344 180 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 FAM3BP58499 235 aaPredicted RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 UBE2V2Q15819 145 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 INO80CQ6PI98 192 aaPredicted RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 TPRX1Q8N7U7 411 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 SRSF12Q8WXF0 261 aaKnown RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 OPN3Q9H1Y3 402 aaPredicted RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 RGPD4Q7Z3J3 1758 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 FTH1P19P0C7X4 201 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 RPS20P60866 119 aaKnown RBP9.9□□□□□ -0.82
PTPN4-201ENST00000263708 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 DOCK1Q14185 1865 aa9.9□□□□□ -0.82
PTPN4-201ENST00000263708 FOXI3A8MTJ6 420 aaPredicted RBP9.9□□□□□ -0.83
PTPN4-201ENST00000263708 H3BRM9 83 aa9.9□□□□□ -0.83
PTPN4-201ENST00000263708 FGF5P12034 268 aa9.9□□□□□ -0.83
PTPN4-201ENST00000263708 DOCK11Q5JSL3 2073 aa9.9□□□□□ -0.83
PTPN4-201ENST00000263708 CTSVO60911 334 aa9.9□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV3-23P01764 117 aa9.9□□□□□ -0.83
PTPN4-201ENST00000263708 CD1AP06126 327 aa9.9□□□□□ -0.83
PTPN4-201ENST00000263708 TRBV20OR9-2A0A075B6H5 130 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 PROB1E7EW31 1015 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 DLL1O00548 723 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 C21orf140B9A014 251 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 HOXA3O43365 443 aaPredicted RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 FHL5Q5TD97 284 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 TCF24Q7RTU0 167 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 RNASEH2CQ8TDP1 164 aaKnown RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 MRPL24Q96A35 216 aaKnown RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 LRRC3BQ96PB8 259 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 SAPCD1Q5SSQ6 148 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 RASL10BQ96S79 203 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 CEP250Q9BV73 2442 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 TMEM229AB2RXF0 380 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 HPRT1P00492 218 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 ERGP11308 486 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 MEF2CQ06413 473 aaPredicted RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 CISD1Q9NZ45 108 aaKnown RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 ISG15P05161 165 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 TMEFF2Q9UIK5 374 aaPredicted RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 NACAE9PAV3 2078 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 A0A1B0GV72 72 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 PGPA6NDG6 321 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 KCNE5Q9UJ90 142 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 HMSDA8MTL9 139 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 MOSPD3O75425 235 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 TJP1Q07157 1748 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 SOD3P08294 240 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 CD69Q07108 199 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 C12orf73Q69YU5 71 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 MTURNQ8N3F0 131 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 FAM89BQ8N5H3 189 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 TP53I13Q8NBR0 393 aaPredicted RBP9.89□□□□□ -0.83
PTPN4-201ENST00000263708 ANKRD20A5PA0PJZ0 165 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 RND2P52198 227 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 OR1P1Q8NH06 330 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 C10orf35Q96D05 121 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 ZNF488Q96MN9 340 aa9.89□□□□□ -0.83
PTPN4-201ENST00000263708 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 TRAV8-6A0A0B4J262 113 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 HMX2A2RU54 273 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV4-39P01824 125 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 PGFP49763 221 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 CYB561D1Q8N8Q1 229 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 OR2Y1Q8NGV0 311 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 TBX21Q9UL17 535 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 H3BTX0 84 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 NKX2-2O95096 273 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 SMIM6P0DI80 62 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 RAE1P78406 368 aaKnown RBP9.88□□□□□ -0.83
PTPN4-201ENST00000263708 PLPPR5Q32ZL2 321 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 PSMG3Q9BT73 122 aaPredicted RBP9.88□□□□□ -0.83
PTPN4-201ENST00000263708 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
PTPN4-201ENST00000263708 FOLR2P14207 255 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 ZNF645Q8N7E2 425 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 C17orf47Q8NEP4 570 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 SSC4DQ8WTU2 575 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 C7orf77A4D0Y5 90 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms