RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MS4A5Q9H3V2 200 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 TREM1Q9NP99 234 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 AK3Q9UIJ7 227 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 XRCC3O43542 346 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 CRYZL1O95825 349 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 F12P00748 615 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 HOXA1P49639 335 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 KLK9Q2XQG4 91 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 MOB3BQ86TA1 216 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 CDH26Q8IXH8 852 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 KLK9Q9UKQ9 250 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 WIPI2Q9Y4P8 454 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 FAM90A8PA6NJQ4 464 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 M0R135 149 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB3DO95716 219 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 IGHV4-39P01824 125 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 PSG2P11465 335 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 PLA2G2AP14555 144 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 HNF4GQ14541 408 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 LRRC10Q5BKY1 277 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 BTNL3Q6UXE8 466 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 SEMA6DQ8NFY4 1073 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 OR6K3Q8NGY3 331 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF799Q96GE5 643 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM269A0A1B0GVZ9 245 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF732B4DXR9 585 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 HLA-GP17693 338 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 SNCAP37840 140 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB5CP51148 216 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 TMPRSS3P57727 454 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 NMSQ5H8A3 153 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 MORN5Q5VZ52 161 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 OR2T2Q6IF00 324 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 ADAMTSL5Q6ZMM2 481 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 LGI3Q8N145 548 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 MUC20Q8N307 709 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 OR13A1Q8NGR1 328 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 LILRB4Q8NHJ6 448 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 GAL3ST2Q9H3Q3 398 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 FXYD6-FXYD2A0A087WZ82 144 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 SSTR5P35346 364 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 HTD2P86397 168 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 CD276Q5ZPR3 534 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 C10orf99Q6UWK7 81 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC25A42Q86VD7 318 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 HOGA1Q86XE5 327 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 CNEP1R1Q8N9A8 125 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 OR13C9Q8NGT0 318 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 FAM216AQ8WUB2 273 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 GNPNAT1Q96EK6 184 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 YPEL4Q96NS1 127 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 A8MV72 311 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 M0R036 132 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 AZGP1P25311 298 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 CD40P25942 277 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 UBE2G2P60604 165 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 VMA21Q3ZAQ7 101 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 COX19Q49B96 90 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 PDLIM3Q53GG5 364 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 SPSB1Q96BD6 273 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 FAM212BQ9NTI7 297 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 C1RLQ9NZP8 487 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 THYN1Q9P016 225 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 TUBD1Q9UJT1 453 aa4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 MRPS28Q9Y2Q9 187 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-201ENST00000260810 TRBV6-7A0A0A0MS04 114 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TRBV6-6A0A0A6YYG2 114 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 C13orf42A0A1B0GVH6 325 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 POM121CA8CG34 1229 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 CEBPZOSA8MTT3 80 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 H7C2Y5 167 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 J3QW42 95 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 PI3P19957 117 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 PRRX1P54821 245 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 OR8G1Q15617 311 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 SAMD13Q5VXD3 122 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 HAGHLQ6PII5 290 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF788Q6ZQV5 615 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF818PQ6ZRF7 136 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 ST6GALNAC3Q8NDV1 305 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 PP6455Q8WZ26 134 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM210A6NLX4 147 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 OR8U8P0C7N1 319 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 OR8U9P0C7N5 309 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 COMPP49747 757 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 SSTP61278 116 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB35Q15286 201 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 CEACAM21Q3KPI0 293 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 KCTD9Q7L273 389 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 COMMD1Q8N668 190 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 LEAP2Q969E1 77 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 PIGTQ969N2 578 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM59Q9BXS4 323 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 GPR132Q9UNW8 380 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 MDFIC2A0A1B0GVS7 189 aa4.53□□□□□ -1.68
TOPBP1-201ENST00000260810 E5RGE8 158 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms