RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 EIF4EBP1Q13541 118 aaPredicted RBP11.36□□□□□ -0.59
VPS25-201ENST00000253794 LRRC75BQ2VPJ9 315 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 TRIQKQ629K1 86 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 ZBTB34Q8NCN2 500 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 PIFOQ8TCI5 191 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 SSMEM1Q8WWF3 244 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 BORCS5Q969J3 196 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 C5orf30Q96GV9 206 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 FXYD6Q9H0Q3 95 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 SDHAF2Q9NX18 166 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 RNF150Q9ULK6 438 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 OR5H14A6NHG9 310 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 DISC1C4P0D8 188 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 IFNA6P05013 189 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 BRS3P32247 399 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 FAUP35544 74 aaKnown RBP11.35□□□□□ -0.59
VPS25-201ENST00000253794 HERV-K104P61576 105 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 TSPAN5P62079 268 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 EBI3Q14213 229 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 RPL39P5Q59GN2 51 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 RBMS3Q6XE24 437 aaKnown RBP11.35□□□□□ -0.59
VPS25-201ENST00000253794 TERB2Q8NHR7 220 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 AKR1E2Q96JD6 320 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 JMJD8Q96S16 334 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 PRRT1Q99946 306 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 NABP2Q9BQ15 211 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 C7orf50Q9BRJ6 194 aaKnown RBP11.35□□□□□ -0.59
VPS25-201ENST00000253794 DPAGT1Q9H3H5 408 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 HRASLSQ9HDD0 168 aa11.35□□□□□ -0.59
VPS25-201ENST00000253794 RBM7Q9Y580 266 aaKnown RBP11.35□□□□□ -0.59
VPS25-201ENST00000253794 TIMM23O14925 209 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 AMY2AP04746 511 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 CT45A6P0DMU7 189 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 CT45A5P0DMU8 189 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 CT45A7P0DMV0 189 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 CD1BP29016 333 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 ECI1P42126 302 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 TAGLNQ01995 201 aaKnown RBP11.34□□□□□ -0.59
VPS25-201ENST00000253794 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
VPS25-201ENST00000253794 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 BVESQ8NE79 360 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 OR56B4Q8NH76 319 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 MRGPRFQ96AM1 343 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 SSX3Q99909 188 aa11.34□□□□□ -0.59
VPS25-201ENST00000253794 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
VPS25-201ENST00000253794 NAP1L6A6NFF2 107 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
VPS25-201ENST00000253794 IGHV4-59P01825 116 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 PAX6P26367 422 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 GNRHRP30968 328 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
VPS25-201ENST00000253794 REG1BP48304 166 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 BAMBIQ13145 260 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 SLC9A3R2Q15599 337 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 FAAP20Q6NZ36 180 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 LPCAT3Q6P1A2 487 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 ZDHHC22Q8N966 263 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 SECTM1Q8WVN6 248 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 DDB2Q92466 427 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 ZNF486Q96H40 463 aaPredicted RBP11.33□□□□□ -0.6
VPS25-201ENST00000253794 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 RSRP1Q9BUV0 290 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 SLC5A7Q9GZV3 580 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 ESM1Q9NQ30 184 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 CCL28Q9NRJ3 127 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 ABCB10Q9NRK6 738 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 TCF19Q9Y242 345 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
VPS25-201ENST00000253794 DNAJC9-AS1A6NH13 148 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 H0YJW9 148 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 H3BUX3 64 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 TCF21O43680 179 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 UPK1BO75841 260 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 VENTXO95231 258 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 IFNA2P01563 188 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 MC5RP33032 325 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 THBS3P49746 956 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 FXYD4P59646 89 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 ZNF57Q68EA5 555 aaPredicted RBP11.32□□□□□ -0.6
VPS25-201ENST00000253794 ZNF818PQ6ZRF7 136 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 SLC38A6Q8IZM9 456 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 Q8N6K4 173 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 OR51S1Q8NGJ8 323 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 OR13C8Q8NGS7 320 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
VPS25-201ENST00000253794 SCP2D1Q9UJQ7 156 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 PITPNC1Q9UKF7 332 aa11.32□□□□□ -0.6
VPS25-201ENST00000253794 A6NDX4 124 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 J3QRK9 145 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 M0R1X1 148 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms