RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PNRC1Q12796 327 aaPredicted RBP3.95□□□□□ -1.78
VPS13C-201ENST00000249837 MRPL54Q6P161 138 aaKnown RBP3.95□□□□□ -1.78
VPS13C-201ENST00000249837 COMMD5Q9GZQ3 224 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 RNF122Q9H9V4 155 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 LYRM2Q9NU23 88 aaPredicted RBP3.95□□□□□ -1.78
VPS13C-201ENST00000249837 ICAM4Q14773 271 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 REC114Q7Z4M0 266 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 POM121L2Q96KW2 1035 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 MANBALQ9NQG1 85 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 A0A1B0GV90 55 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 LRRC3CA6NJW4 275 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 SYNGR3O43761 229 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 RTL8BQ17RB0 113 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 SPNS3Q6ZMD2 512 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 EGLN1Q9GZT9 426 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 IL17BQ9UHF5 180 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 ARL2-SNX15V9GYD0 113 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 B4E171 279 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 DNPH1O43598 174 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 GALR2O43603 387 aaPredicted RBP3.95□□□□□ -1.78
VPS13C-201ENST00000249837 CA11O75493 328 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 RHBDL1O75783 438 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 TSPAN7P41732 249 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 KIAA1644Q3SXP7 199 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF506Q5JVG8 444 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 MIC13Q5XKP0 118 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 STUMQ69YW2 141 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 SLC24A4Q8NFF2 622 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 IGKV1-12A0A0C4DH73 117 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 IGKV1D-12P01611 117 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 IGLV3-19P01714 112 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 NPY1RP25929 384 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 MOGAT3Q86VF5 341 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 FADS6Q8N9I5 356 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 OR1P1Q8NH06 330 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 C18orf12Q96KH6 178 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 HSPB9Q9BQS6 159 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 RFPL3SP0C7P2 107 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 CRISP2P16562 243 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 DDTP30046 118 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 CALHM1Q8IU99 346 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 BLNKQ8WV28 456 aa3.95□□□□□ -1.78
VPS13C-201ENST00000249837 LRRC30A6NM36 301 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 COX7A2P2O60397 106 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CELA3AP09093 270 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 RPEL1Q2QD12 228 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 HES3Q5TGS1 186 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 FAM89BQ8N5H3 189 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 DNASE2BQ8WZ79 361 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 SARAFQ96BY9 339 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 GALNT14Q96FL9 552 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CHCHD2Q9Y6H1 151 aaPredicted RBP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 HNRNPA3P51991 378 aaKnown RBP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 SUMO1P63165 101 aaKnown RBP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 ACSM6Q6P461 480 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 LHFPL1Q86WI0 220 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 ZADH2Q8N4Q0 377 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CORO2AQ92828 525 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CHRNA10Q9GZZ6 450 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 GLRX2Q9NS18 164 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 NAT8BQ9UHF3 227 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 IGKV1-27A0A075B6S5 117 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 TRAV17A0A0B4J275 112 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 HRASP01112 189 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 TAF15Q92804 592 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 IGF2RP11717 2491 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 DSCAML1Q8TD84 2053 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 hCG_38984A0A1B0GV85 526 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 PRR19A6NJB7 356 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 K7N7A8 449 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CHEK1O14757 476 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 WNT9BO14905 357 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 AMTP48728 403 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CEACAM21Q3KPI0 293 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 Q8WTZ3 238 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 TBX15Q96SF7 602 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 TRAV38-1A0A0B4J264 116 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 PINLYPA6NC86 204 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 TFF1P04155 84 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 SP1P08047 785 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 RTP5Q14D33 572 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 ATP1A1-AS1Q5TC04 95 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 FGFRL1Q8N441 504 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 DECR2Q9NUI1 292 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 COA4Q9NYJ1 87 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 HELTA6NFD8 242 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CD55P08174 381 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 SUCLG1P53597 346 aaKnown RBP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 SGMS2Q8NHU3 365 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 SAP25Q8TEE9 199 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 MISP3Q96FF7 219 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CLDN16Q9Y5I7 305 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 NCOR2Q9Y618 2525 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 IGHV3-21A0A0B4J1V1 117 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 HOXA6P31267 233 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CAMPP49913 170 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 BHLHA15Q7RTS1 189 aaPredicted RBP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 DBX1A6NMT0 343 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 HSPB1P04792 205 aaKnown RBP3.94□□□□□ -1.78
VPS13C-201ENST00000249837 KDF1Q8NAX2 398 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms