RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 UBR3Q6ZT12 1888 aa9.97□□□□□ -0.81
LAMA4-201ENST00000230538 ZNF826PQ6ZT77 177 aa9.97□□□□□ -0.81
LAMA4-201ENST00000230538 TMEM252Q8N6L7 170 aa9.97□□□□□ -0.81
LAMA4-201ENST00000230538 OR8G5Q8NG78 346 aa9.97□□□□□ -0.81
LAMA4-201ENST00000230538 FGF11Q92914 225 aa9.97□□□□□ -0.81
LAMA4-201ENST00000230538 DSPPQ9NZW4 1301 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 CKS2P33552 79 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 SLC25A47Q6Q0C1 308 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 SCN3AQ9NY46 2000 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 IGHV3OR16-12A0A075B7B8 117 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 TRBV5-5A0A0J9YX44 114 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 H7C2G1 150 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 SMUG1Q53HV7 270 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 DDA1Q9BW61 102 aa9.96□□□□□ -0.81
LAMA4-201ENST00000230538 TDRD15B5MCY1 1934 aaKnown RBP9.96□□□□□ -0.81
LAMA4-201ENST00000230538 ZNFX1Q9P2E3 1918 aaKnown RBP9.96□□□□□ -0.81
LAMA4-201ENST00000230538 A0A1W2PP11 408 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 PGLYRP1O75594 196 aaPredicted RBP9.96□□□□□ -0.82
LAMA4-201ENST00000230538 NAT2P11245 290 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 CISD1Q9NZ45 108 aaKnown RBP9.96□□□□□ -0.82
LAMA4-201ENST00000230538 PILRAQ9UKJ1 303 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 ZNF256Q9Y2P7 627 aaPredicted RBP9.96□□□□□ -0.82
LAMA4-201ENST00000230538 TMEM56-RWDD3S4R434 201 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 TUBGCP6Q96RT7 1819 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 A6NJY4 79 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 FTH1P19P0C7X4 201 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 SSTR5P35346 364 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 SELENOTP62341 195 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 MESP2Q0VG99 397 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 SPRED2Q7Z698 418 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 STPG3Q8N7X2 389 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 C7orf66A4D0T2 115 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 PGPA6NDG6 321 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 OR2A4O95047 310 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 OR2A7Q96R45 310 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 PPP1R3EQ9H7J1 279 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.82
LAMA4-201ENST00000230538 TRPM6Q9BX84 2022 aa9.96□□□□□ -0.82
LAMA4-201ENST00000230538 RBBP6Q7Z6E9 1792 aaKnown RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 SNAI3Q3KNW1 292 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 AMELYQ99218 206 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 NRIP2Q9BQI9 281 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 HSPB9Q9BQS6 159 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 NKX2-8O15522 239 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 ISG15P05161 165 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 EIF4EBP2Q13542 120 aaPredicted RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 SP7Q8TDD2 431 aaPredicted RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 ZFC3H1O60293 1989 aaKnown RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 SIAH2O43255 324 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 FCGR2BP31994 310 aaPredicted RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 UQCRFS1P47985 274 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 TMPRSS3P57727 454 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 RTN4RQ9BZR6 473 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 NUDT3O95989 172 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 HKR1P10072 659 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 FAM209AQ5JX71 171 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 SELENOHQ8IZQ5 122 aaKnown RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 IFNL4K9M1U5 179 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 HLA-DQB1P01920 261 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 MT-ND6P03923 174 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 COMPP49747 757 aaPredicted RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 SPATA45Q537H7 98 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 MIC13Q5XKP0 118 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 PIMREGQ9BSJ6 248 aa9.95□□□□□ -0.82
LAMA4-201ENST00000230538 COL11A1P12107 1806 aaPredicted RBP9.95□□□□□ -0.82
LAMA4-201ENST00000230538 ATXN7O15265 892 aaPredicted RBP9.94□□□□□ -0.82
LAMA4-201ENST00000230538 CTSSP25774 331 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 PSG9Q00887 426 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 PRSS8Q16651 343 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 DNLZQ5SXM8 178 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 ABLIM2Q6H8Q1 611 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 GPR61Q9BZJ8 451 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A10PA6NDY2 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A18PA6NE21 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A16PA6NEW6 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A20PA6NIJ5 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A8PA6NJQ4 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A7PA6NKC0 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A22PA8MWA6 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A12PA8MX19 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A5PA8MXJ8 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A23PA8MXZ1 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A15PP0C7V4 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A13PP0C7W8 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A14PP0C7W9 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 FAM90A24PP0C7X0 464 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
LAMA4-201ENST00000230538 DDB2Q92466 427 aa9.94□□□□□ -0.82
LAMA4-201ENST00000230538 LSM10Q969L4 123 aaKnown RBP9.94□□□□□ -0.82
LAMA4-201ENST00000230538 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
LAMA4-201ENST00000230538 GPR132Q9UNW8 380 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms