RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CITED4Q96RK1 184 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 IFI27L2Q9H2X8 130 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 RPUSD1Q9UJJ7 312 aaKnown RBP14.95□□□□□ -0.02
VIM-201ENST00000224237 LRRK2Q5S007 2527 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 USF3Q68DE3 2245 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 TRBV23-1A0A0A0MS06 115 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 RPS10-NUDT3A0A1W2PQS6 291 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 LEUTXA8MZ59 168 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 CLDN1O95832 211 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 NFYBP25208 207 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 RPL30P62888 115 aaKnown RBP14.95□□□□□ -0.02
VIM-201ENST00000224237 ZNF585BQ52M93 769 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 PRAMEF5Q5TYX0 476 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 FAM219AQ8IW50 185 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 FOXRED2Q8IWF2 684 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 TCTEX1D2Q8WW35 142 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 CHODLQ9H9P2 273 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 GAB2Q9UQC2 676 aa14.95□□□□□ -0.02
VIM-201ENST00000224237 GPR37O15354 613 aa14.94□□□□□ -0.02
VIM-201ENST00000224237 MBPP02686 304 aaPredicted RBP14.94□□□□□ -0.02
VIM-201ENST00000224237 NUP62P37198 522 aaPredicted RBP14.94□□□□□ -0.02
VIM-201ENST00000224237 TMEM155Q4W5P6 130 aa14.94□□□□□ -0.02
VIM-201ENST00000224237 AVPI1Q5T686 147 aa14.94□□□□□ -0.02
VIM-201ENST00000224237 HEPN1Q6WQI6 88 aa14.94□□□□□ -0.02
VIM-201ENST00000224237 OR1S1Q8NH92 325 aa14.94□□□□□ -0.02
VIM-201ENST00000224237 LSM10Q969L4 123 aaKnown RBP14.94□□□□□ -0.02
VIM-201ENST00000224237 LSM5Q9Y4Y9 91 aaKnown RBP14.94□□□□□ -0.02
VIM-201ENST00000224237 ST8SIA3O43173 380 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 MMP23AO75900 390 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 IGKV1-39P01597 117 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 IGHV3-7P01780 117 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 IGKV1D-39P04432 117 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 SLC25A6P12236 298 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 CDKN1AP38936 164 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 AKR1C2P52895 323 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 CT45A1Q5HYN5 189 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.93□□□□□ -0.02
VIM-201ENST00000224237 ZNF439Q8NDP4 499 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 CT45A3Q8NHU0 189 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 RNASE11Q8TAA1 199 aaKnown RBP14.93□□□□□ -0.02
VIM-201ENST00000224237 LEAP2Q969E1 77 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 RAB39BQ96DA2 213 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 MIOXQ9UGB7 285 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 FAM208BQ5VWN6 2430 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 KANTRA0A1W2PQU2 76 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 K7EPK0 472 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 SLC31A2O15432 143 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 PPIHO43447 177 aaKnown RBP14.93□□□□□ -0.02
VIM-201ENST00000224237 CCL3L1P16619 93 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 DUTP33316 252 aaKnown RBP14.93□□□□□ -0.02
VIM-201ENST00000224237 SLC51BQ86UW2 128 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 FAM71E2Q8N5Q1 922 aa14.93□□□□□ -0.02
VIM-201ENST00000224237 RAB29O14966 203 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 RAMP3O60896 148 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 TMEM33P57088 247 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 UTF1Q5T230 341 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 ZNF841Q6ZN19 808 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 SPAG16Q8N0X2 631 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 OR8B3Q8NGG8 313 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 RRNAD1Q96FB5 475 aaKnown RBP14.92□□□□□ -0.02
VIM-201ENST00000224237 AQP10Q96PS8 301 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 OR8B2Q96RD0 313 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 SPOCK3Q9BQ16 436 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 POMT1Q9Y6A1 747 aa14.92□□□□□ -0.02
VIM-201ENST00000224237 A0A1B0GU03 582 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 LINC00473A8K010 186 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 E5RGE8 158 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 BCL2L11O43521 198 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 PROP1O75360 226 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 LPAR6P43657 344 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 NKX2-1P43699 371 aaPredicted RBP14.91□□□□□ -0.02
VIM-201ENST00000224237 SLC25A48Q6ZT89 311 aaKnown RBP14.91□□□□□ -0.02
VIM-201ENST00000224237 CD300LFQ8TDQ1 290 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 SCARB1Q8WTV0 552 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 MARVELD3Q96A59 401 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 NEIL1Q96FI4 390 aaPredicted RBP14.91□□□□□ -0.02
VIM-201ENST00000224237 NSG2Q9Y328 171 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 YLPM1P49750 1951 aaKnown RBP14.91□□□□□ -0.02
VIM-201ENST00000224237 A0A0G2JRQ6 117 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 C17orf98A8MV24 154 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 M0R1X1 148 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 KCNAB3O43448 404 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 NDUFS7O75251 213 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 ATG12O94817 140 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 F12P00748 615 aaPredicted RBP14.91□□□□□ -0.02
VIM-201ENST00000224237 GNG10P50151 68 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 TLE4Q04727 773 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 OR2B11Q5JQS5 317 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 GPR146Q96CH1 333 aa14.91□□□□□ -0.02
VIM-201ENST00000224237 SAA2-SAA4A0A096LPE2 208 aa14.9□□□□□ -0.02
VIM-201ENST00000224237 A0A1W2PPE3 182 aa14.9□□□□□ -0.02
VIM-201ENST00000224237 IGKV1-5P01602 117 aa14.9□□□□□ -0.02
VIM-201ENST00000224237 SAA2P0DJI9 122 aaPredicted RBP14.9□□□□□ -0.02
VIM-201ENST00000224237 BRWD1-AS2P59051 145 aa14.9□□□□□ -0.02
VIM-201ENST00000224237 ZNF816Q0VGE8 651 aaPredicted RBP14.9□□□□□ -0.02
VIM-201ENST00000224237 RPL39P5Q59GN2 51 aa14.9□□□□□ -0.02
VIM-201ENST00000224237 LYG1Q8N1E2 194 aa14.9□□□□□ -0.02
VIM-201ENST00000224237 ARID1AO14497 2285 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 A0A1W2PPH5 198 aa14.89□□□□□ -0.03
VIM-201ENST00000224237 MSGN1A6NI15 193 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms