RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 PROP1O75360 226 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF134P52741 427 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF816Q0VGE8 651 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 UTF1Q5T230 341 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 EIF5AL1Q6IS14 154 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF295-AS1Q8N0V1 137 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 SPAG16Q8N0X2 631 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 TMEM252Q8N6L7 170 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 SLC25A31Q9H0C2 315 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 RAB9BQ9NP90 201 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 TMEM106BQ9NUM4 274 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 MMP24Q9Y5R2 645 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 NBASA2RRP1 2371 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 ADGRG4Q8IZF6 3080 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 COL6A6A6NMZ7 2263 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 PPIAL4EA0A075B759 164 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 BORCS7-ASMTA0A0B4J1R7 106 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 A8MXK9 166 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 B8ZZF3 427 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 PPIAL4DF5H284 164 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 TMPRSS2O15393 492 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 CLDN14O95500 239 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 PPIAL4FP0DN26 164 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 LINC00205P59089 165 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 OR1S2Q8NGQ3 325 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 CA5BP1Q8WTZ4 195 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 CCL17Q92583 94 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 LRRC46Q96FV0 321 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 GFOD1Q9NXC2 390 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 CISD1Q9NZ45 108 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 PLA2G2EQ9NZK7 142 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 PPIAL4AQ9Y536 164 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 NBEAQ8NFP9 2946 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 FBXO24O75426 580 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 S1PR2O95136 353 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 IGHV3-7P01780 117 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 P0C879 139 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 CORO2AQ92828 525 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 IFI27L2Q9H2X8 130 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 KCNJ16Q9NPI9 418 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 SESN1Q9Y6P5 492 aa14.25□□□□□ -0.13
RABGGTA-201ENST00000216840 ITGB1BP1O14713 200 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 DUTP33316 252 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 GINS3Q9BRX5 216 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 LINC00574Q9H8X3 128 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 COA4Q9NYJ1 87 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 LPAR3Q9UBY5 353 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 CACNA1AO00555 2505 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF729A6NN14 1252 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 TNFRSF13BO14836 293 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 SLC31A2O15432 143 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 KRASP01116 189 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 G6PCP35575 357 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 RAB40CQ96S21 281 aa14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 SLC25A10Q9UBX3 287 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-201ENST00000216840 HCFC1P51610 2035 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 YLPM1P49750 1951 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF705EA8MWA4 302 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 SYNGR2O43760 224 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 NDUFB7P17568 137 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 LOXP28300 417 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 SULT1A2P50226 295 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 NCR3LG1Q68D85 454 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 LEAP2Q969E1 77 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 TAS2R3Q9NYW6 316 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 IDI2-AS1Q9NZ38 188 aa14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 ANKHD1Q8IWZ3 2542 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 SMG1Q96Q15 3661 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-201ENST00000216840 FCN3O75636 299 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 ATG12O94817 140 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 BAXQ07812 192 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 RPL39P5Q59GN2 51 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 CT45A1Q5HYN5 189 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 CT45A3Q8NHU0 189 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 SAT2Q96F10 170 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 SMIM8Q96KF7 97 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 LINC00052Q96N35 136 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 ABHD14AQ9BUJ0 271 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 hADV38S2A0JD32 116 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 TOR1AO14656 332 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 CST7O76096 145 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 ZP3P21754 424 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 RAB7AP51149 207 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 DYNLT3P51808 116 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 RPL23AP62750 156 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 TFF3Q07654 80 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 CLINT1Q14677 625 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF672Q499Z4 452 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 MIDNQ504T8 468 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 GAB2Q9UQC2 676 aa14.22□□□□□ -0.13
RABGGTA-201ENST00000216840 M0R1X1 148 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 SHOXO15266 292 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 TXNL1O43396 289 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 MMP23AO75900 390 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 SEC11BP0C7V7 166 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 LYPD2Q6UXB3 125 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 C1orf229Q6ZS94 237 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 MUC15Q8N387 334 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 ZNF439Q8NDP4 499 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 OR5C1Q8NGR4 320 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms