RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TMEM204Q9BSN7 226 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 NXF2Q9GZY0 626 aaKnown RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 PARP12Q9H0J9 701 aaKnown RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 DLL3Q9NYJ7 618 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 ZNF705GA8MUZ8 300 aaPredicted RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 RNASE1P07998 156 aaKnown RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 USF1P22415 310 aaPredicted RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 RAB9AP51151 201 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 UBE2L3P68036 154 aaKnown RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 ZXDCQ2QGD7 858 aaPredicted RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 FAM106AQ4KMX7 169 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 H3F3CQ6NXT2 135 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 C19orf35Q6ZS72 473 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 SSX7Q7RTT5 188 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 ZNF429Q86V71 674 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 C9orf106Q8NAJ2 232 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 BLNKQ8WV28 456 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 EEF1AKMT3Q96AZ1 226 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 PARD6AQ9NPB6 346 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 PDCD11Q14690 1871 aaKnown RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 IGSF23A1L1A6 192 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 KLF4O43474 513 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 GATCO43716 136 aaKnown RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 PDE6DO43924 150 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 SLC6A1P30531 599 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 NDUFA6P56556 154 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 RELQ04864 619 aaPredicted RBP3.63□□□□□ -1.83
CFTR-201ENST00000003084 COX19Q49B96 90 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 FAM74A3Q4VXF1 159 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 EBLN2Q6P2I7 272 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 ACP7Q6ZNF0 438 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 C20orf204Q6ZNR8 217 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 OR4X1Q8NH49 305 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 LPAR5Q9H1C0 372 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 PTPRFP10586 1907 aa3.63□□□□□ -1.83
CFTR-201ENST00000003084 A0A0G2JMM0 328 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 A0A1W2PPB8 328 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 A0A1W2PRS3 328 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 KIR3DP1A8MWS1 328 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 G3V3Q6 166 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 MPDU1O75352 247 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 CECR9P0C854 216 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 PSG9Q00887 426 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 PAX5Q02548 391 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 FAM27E3Q08E93 113 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 TMEM241Q24JQ0 296 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 PRR27Q6MZM9 219 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SLC24A4Q8NFF2 622 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 Q96M66 194 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 OPN4Q9UHM6 478 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 GOLT1BQ9Y3E0 138 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 HILPDAQ9Y5L2 63 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 TANC1Q9C0D5 1861 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 PLXNA3P51805 1871 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 KCNAB3O43448 404 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 IGHV3-13P01766 116 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 IGHV3-7P01780 117 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 MFAP4P55083 255 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 RPL8P62917 257 aaKnown RBP3.62□□□□□ -1.83
CFTR-201ENST00000003084 GUK1Q16774 197 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 ANKRD55Q3KP44 614 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 FAM209BQ5JX69 171 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SLC7A5P1Q8MH63 180 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 OR4P4Q8NGL7 312 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 MRPL24Q96A35 216 aaKnown RBP3.62□□□□□ -1.83
CFTR-201ENST00000003084 AICDAQ9GZX7 198 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 MIXL1Q9H2W2 232 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 hCG_38984A0A1B0GV85 526 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 OR2T8A6NH00 312 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 C15orf62A8K5M9 175 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SEC14L6B5MCN3 397 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 BMPR1BO00238 502 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 ADAM11O75078 769 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 OPN1MWP04001 364 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 OPN1MW2P0DN77 364 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 OPN1MW3P0DN78 364 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SELENOTP62341 195 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 POLR2GP62487 172 aaKnown RBP eCLIP3.62□□□□□ -1.83
CFTR-201ENST00000003084 BTN1A1Q13410 526 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 UNQ5815/PRO19632Q6UWF5 114 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 MRGPRFQ96AM1 343 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 C1orf43Q9BWL3 253 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SIRT4Q9Y6E7 314 aaPredicted RBP3.62□□□□□ -1.83
CFTR-201ENST00000003084 NKX2-6A6NCS4 301 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 HYPMO75409 117 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 KLF7O75840 302 aaPredicted RBP3.62□□□□□ -1.83
CFTR-201ENST00000003084 HPXP02790 462 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SFTA3P0C7M3 94 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 RPL30P62888 115 aaKnown RBP3.62□□□□□ -1.83
CFTR-201ENST00000003084 CLLU1Q5K131 121 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 LINC01590Q5TEZ4 76 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 DYRK2Q92630 601 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 LSM10Q969L4 123 aaKnown RBP3.62□□□□□ -1.83
CFTR-201ENST00000003084 NPAS1Q99742 590 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 DCTN5Q9BTE1 182 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 TMEM222Q9H0R3 208 aa3.62□□□□□ -1.83
CFTR-201ENST00000003084 SLC25A22Q9H936 323 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms