RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 SKA2Q8WVK7 121 aaPredicted RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 CAPSLQ8WWF8 208 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 ITLN2Q8WWU7 325 aaPredicted RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 ANKRD7Q92527 254 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 PSMF1Q92530 271 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 ELMO1Q92556 727 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 S100PBPQ96BU1 408 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 RMND5BQ96G75 393 aaPredicted RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 MRPL48Q96GC5 212 aaKnown RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 SNF8Q96H20 258 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 NAP1L5Q96NT1 182 aaPredicted RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 QKIQ96PU8 341 aaKnown RBP eCLIP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 CYTH2Q99418 400 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 CCDC77Q9BR77 488 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 TBL1XR1Q9BZK7 514 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 TSGA10Q9BZW7 698 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 IL22Q9GZX6 179 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 FAM96AQ9H5X1 160 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 XKR8Q9H6D3 395 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 ZNF160Q9HCG1 818 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 ANKHQ9HCJ1 492 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 MRPS30Q9NP92 439 aaKnown RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 IFNKQ9P0W0 207 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 TAC3Q9UHF0 121 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 C3orf18Q9UK00 162 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 KLF13Q9Y2Y9 288 aaPredicted RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 PCYT1BQ9Y5K3 369 aaPredicted RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 FLNAP21333 2647 aaKnown RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 WNK2Q9Y3S1 2297 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 DYSFO75923 2080 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 CADP27708 2225 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 SPENQ96T58 3664 aaKnown RBP0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 JMJD1CQ15652 2540 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 TLN2Q9Y4G6 2542 aa0.69□□□□□ -2.3
PTP4A2-220ENST00000627328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.69□□□□□ -2.32e-20■■■■■ 75.9
PTP4A2-220ENST00000627328 ZFHX3Q15911 3703 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 SONP18583 2426 aaKnown RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 USF3Q68DE3 2245 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 NSD1Q96L73 2696 aaPredicted RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 NF1P21359 2839 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CSMD1Q96PZ7 3565 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 IGKV1OR2-108A0A075B7D4 117 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TRGV5A0A0B4J1U4 118 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TRBV11-1A0A0K0K1C0 115 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TMEM72A0PK05 275 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 IQCF5A8MTL0 148 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 COL6A5A8TX70 2615 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 H0YGG7 62 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 GOLGA8TH3BQL2 631 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CCL22O00626 93 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TP53I11O14683 189 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 OR1I1O60431 355 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CTNSO60931 367 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 ENTPD6O75354 484 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CTAG2O75638 210 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 OR2J2O76002 312 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 MYO1DO94832 1006 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 VAPBO95292 243 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TTC4O95801 387 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 IFNA16P05015 189 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 SERPINA6P08185 405 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 P0DMU3 169 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 FAM231AP0DMU4 169 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 FAM231CP0DMU5 169 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 MLNP12872 115 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CR1P17927 2039 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 OGNP20774 298 aaKnown RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 PEBP1P30086 187 aaKnown RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 SERPINB1P30740 379 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 RPL22P35268 128 aaKnown RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 OPRM1P35372 400 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 MYCNOSP40205 109 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 HNMTP50135 292 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 AP1S2P56377 157 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 OR4D2P58180 307 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 MLF1P58340 268 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 PSPHP78330 225 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 BASP1P80723 227 aaKnown RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 PLGLB1Q02325 96 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 ATP5G2Q06055 141 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TFF3Q07654 80 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 STX4Q12846 297 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 POU6F1Q14863 301 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 LGALSLQ3ZCW2 172 aaPredicted RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 FBXL19-AS1Q494R0 122 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 ARFGEF3Q5TH69 2177 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 MALRD1Q5VYJ5 2156 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 DUPD1Q68J44 220 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 AGTRAPQ6RW13 159 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 Q6ZQT7 251 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 SSX8Q7RTT4 187 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 DOLPP1Q86YN1 238 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 SLC13A5Q86YT5 568 aaPredicted RBP0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CRLF3Q8IUI8 442 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 KRT222Q8N1A0 295 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 CYP4Z2PQ8N1L4 340 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 TCAIMQ8N3R3 496 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 C3orf22Q8N5N4 141 aa0.68□□□□□ -2.3
PTP4A2-220ENST00000627328 C2orf73Q8N5S3 287 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms