RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 DUSP18Q8NEJ0 188 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 PXT1Q8NFP0 134 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OR56B2PQ8NGI1 322 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OR4D6Q8NGJ1 314 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OR56B4Q8NH76 319 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 TOMM40LQ969M1 308 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 MRPS24Q96EL2 167 aaKnown RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 C1orf147Q96MC9 270 aaPredicted RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 SCGB3A2Q96PL1 93 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 SPACA5Q96QH8 159 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 PRRT1Q99946 306 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 GAL3ST1Q99999 423 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 MICU1Q9BPX6 476 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 CACNG6Q9BXT2 260 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 BCL2L14Q9BZR8 327 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 SELENOIQ9C0D9 397 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 AUNIPQ9H7T9 357 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 RHOFQ9HBH0 211 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IL36GQ9NZH8 169 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 ZNF319Q9P2F9 582 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 MTFP1Q9UDX5 166 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 POLDIP2Q9Y2S7 368 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 COL6A5A8TX70 2615 aa3.84□□□□□ -1.8
VPS29-212ENST00000621131 MAP1AP78559 2803 aaPredicted RBP3.84□□□□□ -1.8
VPS29-212ENST00000621131 ARHGAP21Q5T5U3 1957 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 ZNF407Q9C0G0 2248 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TMEM235A6NFC5 223 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TMEM210A6NLX4 147 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 ZNF850A8MQ14 1090 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 EEF1E1-BLOC1S5C9J1V9 151 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 PLA2G10O15496 165 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 AKR7A2O43488 359 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 SSNA1O43805 119 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TIMM8AO60220 97 aaPredicted RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 CA11O75493 328 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TCRBP04435 133 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 CCL2P13500 99 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 SPNP16150 400 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 HIST1H1DP16402 221 aaKnown RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 ZNF14P17017 642 aaPredicted RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 PSMB1P20618 241 aaKnown RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 GIFP27352 417 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 BLVRBP30043 206 aaPredicted RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR3A3P47888 321 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 SRP9P49458 86 aaKnown RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 EFNB2P52799 333 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TAS2R31P59538 309 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 ARPC4P59998 168 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 GNG3P63215 75 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 ZNF92Q03936 586 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 UNC119Q13432 240 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 GK2Q14410 553 aaPredicted RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR8G1Q15617 311 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 UBE2V2Q15819 145 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TATDN3Q17R31 274 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 RSPO1Q2MKA7 263 aaPredicted RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 TIMM23BQ5SRD1 257 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 METTL11BQ5VVY1 283 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TMEM42Q69YG0 159 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 STEAP1BQ6NZ63 245 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 FBXW12Q6X9E4 464 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 LINC00596Q86U02 117 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 ZNF573Q86YE8 665 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 Q8IYB0 196 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OSR2Q8N2R0 312 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 FAM89BQ8N5H3 189 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 SPERTQ8NA61 448 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR5A2Q8NGI9 324 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR5D18Q8NGL1 313 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR5H2Q8NGV7 314 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR51F2Q8NH61 342 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 GPX8Q8TED1 209 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 STARD4Q96DR4 205 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 RNF170Q96K19 258 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 GINS4Q9BRT9 223 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 MARVELD1Q9BSK0 173 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 TM2D1Q9BX74 207 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 C20orf85Q9H1P6 137 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OPN3Q9H1Y3 402 aaPredicted RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 MED28Q9H204 178 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 OR51B6Q9H340 312 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 BANF2Q9H503 90 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 SPACA1Q9HBV2 294 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 HRASLSQ9HDD0 168 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 NGBQ9NPG2 151 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS29-212ENST00000621131 NUDT15Q9NV35 164 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 PLEKHJ1Q9NW61 149 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 B3GNT2Q9NY97 397 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 MRPL15Q9P015 296 aaKnown RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 MYEF2Q9P2K5 600 aaKnown RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 GLS2Q9UI32 602 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 RBMX2Q9Y388 322 aaKnown RBP3.83□□□□□ -1.8
VPS29-212ENST00000621131 ALG5Q9Y673 324 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 DNAJC13O75165 2243 aa3.83□□□□□ -1.8
VPS29-212ENST00000621131 PHF3Q92576 2039 aaKnown RBP3.82□□□□□ -1.8
VPS29-212ENST00000621131 TRAV6A0A075B6T7 132 aa3.82□□□□□ -1.8
VPS29-212ENST00000621131 IGKV1-9A0A0C4DH69 117 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms