RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 RYDENQ9NUL5 291 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 NAT8Q9UHE5 227 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 FOXD3Q9UJU5 478 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 AKAP6Q13023 2319 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 ACACAQ13085 2346 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 ZNF318Q5VUA4 2279 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 PINLYPA6NC86 204 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 K7N7A8 449 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 ATP1A1-AS1Q5TC04 95 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 FBXW9Q5XUX1 488 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 OR2T10Q8NGZ9 312 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 LRRC29Q8WV35 223 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 TMEM171Q8WVE6 324 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 NEIL1Q96FI4 390 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 RCC1LQ96I51 464 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 HS3ST6Q96QI5 342 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 SIRT7Q9NRC8 400 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 TRAPPC1Q9Y5R8 145 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 ZNF716A6NP11 495 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 M0R1B8 84 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 TGOLN2O43493 480 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 UCP1P25874 307 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 FAM3BP58499 235 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 RSPO1Q2MKA7 263 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 TAF15Q92804 592 aaKnown RBP eCLIP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 PCGF1Q9BSM1 259 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 REPIN1Q9BWE0 567 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 SMDT1Q9H4I9 107 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 COA4Q9NYJ1 87 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 IL17BQ9UHF5 180 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 CDX1P47902 265 aaPredicted RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 GNG10P50151 68 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 ZNF83P51522 516 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 SOX8P57073 446 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 MEF2BQ02080 365 aaPredicted RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 HIST3H3Q16695 136 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 SLC35E3Q7Z769 313 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 DEFB123Q8N688 67 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 SCCPDHQ8NBX0 429 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 EDARADDQ8WWZ3 215 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 IL22RA2Q969J5 263 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 TAAR6Q96RI8 345 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 THADAQ6YHU6 1953 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 DUXBA0A1W2PPF3 345 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 K7ESF4 209 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 WNT9BO14905 357 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 PTBP3O95758 552 aaKnown RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 TFF1P04155 84 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 G0S2P27469 103 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 RTP5Q14D33 572 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 DRAM1Q8N682 238 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 OR4D5Q8NGN0 318 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 H1FXQ92522 213 aaKnown RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 CDX2Q99626 313 aaPredicted RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 SPOCK3Q9BQ16 436 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 ZPBPQ9BS86 351 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 CXorf65A6NEN9 183 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 C5orf52A6NGY3 159 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 CEACAM18A8MTB9 384 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 B4DEV8 164 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 ENSAO43768 121 aaKnown RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 ZG16O60844 167 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 CYB5R3P00387 301 aaPredicted RBP5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 HBZP02008 142 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 NTF3P20783 257 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 GLIPR1P48060 266 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 SSTP61278 116 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 MZT1Q08AG7 82 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 GFI1BQ5VTD9 330 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 LYG1Q8N1E2 194 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 PRUNE2Q8WUY3 3088 aa5.85□□□□□ -1.47
SYNPO2-206ENST00000610556 IGHV3OR15-7A0A075B7D8 119 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 LOC102723996A0A087X1L8 192 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 TRAV38-1A0A0B4J264 116 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 NDUFA2O43678 99 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 SP1P08047 785 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 CD55P08174 381 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 SNRPCP09234 159 aaKnown RBP5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 OTX1P32242 354 aaPredicted RBP5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 ERVFC1-1P60608 527 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 SERF2P84101 59 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 GAMTQ14353 236 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 ICAM4Q14773 271 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 SPNS3Q6ZMD2 512 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 TIPARPQ7Z3E1 657 aaKnown RBP5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 LYPD6Q86Y78 171 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 RAB24Q969Q5 203 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 LRFN3Q9BTN0 628 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 C1QTNF5Q9BXJ0 243 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 VSIRQ9H7M9 311 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 KIAA1549LQ6ZVL6 1849 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 C2orf16Q68DN1 1984 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 FREM1Q5H8C1 2179 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 WNK2Q9Y3S1 2297 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 CTXND1A0A1B0GTU2 59 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 S1PR2O95136 353 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 GYPAP02724 150 aa5.84□□□□□ -1.47
SYNPO2-206ENST00000610556 CXCL1P09341 107 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms