RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZNF561Q8N587 486 aa9.99□□□□□ -0.81
USP6NL-206ENST00000609853 CISD2Q8N5K1 135 aaKnown RBP9.99□□□□□ -0.81
USP6NL-206ENST00000609853 UBALD1Q8TB05 177 aa9.99□□□□□ -0.81
USP6NL-206ENST00000609853 Q8TCH9 128 aa9.99□□□□□ -0.81
USP6NL-206ENST00000609853 ATP5SQ99766 215 aa9.99□□□□□ -0.81
USP6NL-206ENST00000609853 OR6C3Q9NZP0 311 aa9.99□□□□□ -0.81
USP6NL-206ENST00000609853 RNF7Q9UBF6 113 aa9.99□□□□□ -0.81
USP6NL-206ENST00000609853 RP1L1Q8IWN7 2480 aaPredicted RBP9.98□□□□□ -0.81
USP6NL-206ENST00000609853 APC2O95996 2303 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 MGAQ8IWI9 3026 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 F8W036 122 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 SPRY3O43610 288 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 YPEL1O60688 119 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 PRH1P02810 166 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 CLINT1Q14677 625 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 DPPA3Q6W0C5 159 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 Q6ZRM9 215 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 HSD17B11Q8NBQ5 300 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 ITLN1Q8WWA0 313 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 YPEL2Q96QA6 119 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 MRPL37Q9BZE1 423 aaKnown RBP9.98□□□□□ -0.81
USP6NL-206ENST00000609853 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
USP6NL-206ENST00000609853 SMDT1Q9H4I9 107 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 C19orf12Q9NSK7 152 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 MSRB2Q9Y3D2 182 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
USP6NL-206ENST00000609853 BTBD17A6NE02 478 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 VSTM5A8MXK1 200 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 F2RL2O00254 374 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 SNAPINO95295 136 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 LY86O95711 162 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 MUC1P15941 1255 aaPredicted RBP9.97□□□□□ -0.81
USP6NL-206ENST00000609853 OMGP23515 440 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 ATP6V0CP27449 155 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 SSTR5P35346 364 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 PPP1CCP36873 323 aaKnown RBP9.97□□□□□ -0.81
USP6NL-206ENST00000609853 DYNLT3P51808 116 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 ARHGDIBP52566 201 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 UCNP55089 124 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 HBG1P69891 147 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 HBG2P69892 147 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 TNFAIP6P98066 277 aaPredicted RBP9.97□□□□□ -0.81
USP6NL-206ENST00000609853 PEA15Q15121 130 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 VHLLQ6RSH7 139 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 C14orf79Q96F83 325 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 SDSLQ96GA7 329 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 FAM234AQ9H0X4 552 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 HIPK2Q9H2X6 1198 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 USF3Q68DE3 2245 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 BOD1L1Q8NFC6 3051 aa9.97□□□□□ -0.81
USP6NL-206ENST00000609853 MAP1BP46821 2468 aaKnown RBP9.96□□□□□ -0.81
USP6NL-206ENST00000609853 A0A1B0GW64 132 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 CST7O76096 145 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 CLDN14O95500 239 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 CLDN1O95832 211 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 IFNA5P01569 189 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 P0C879 139 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 CCKARP32238 428 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 SNCAP37840 140 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 TMEM30BQ3MIR4 351 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 ODF3L1Q8IXM7 274 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 OR2G3Q8NGZ4 309 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 AGMATQ9BSE5 352 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 PBDC1Q9BVG4 233 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 MS4A7Q9GZW8 240 aaPredicted RBP9.96□□□□□ -0.81
USP6NL-206ENST00000609853 GCM1Q9NP62 436 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 NGBQ9NPG2 151 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.81
USP6NL-206ENST00000609853 RNF150Q9ULK6 438 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 GAB2Q9UQC2 676 aa9.96□□□□□ -0.81
USP6NL-206ENST00000609853 PLCE1Q9P212 2302 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 RAB29O14966 203 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 GFRA3O60609 400 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 SCAF4O95104 1147 aaKnown RBP9.96□□□□□ -0.82
USP6NL-206ENST00000609853 IGHV1-46P01743 117 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 CD55P08174 381 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 IRF2P14316 349 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 TNFRSF1AP19438 455 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 TMPRSS3P57727 454 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 AKR1C1Q04828 323 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 ZNF616Q08AN1 781 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 EDDM3AQ14507 147 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 ZNF273Q14593 569 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.96□□□□□ -0.82
USP6NL-206ENST00000609853 TCTEX1D2Q8WW35 142 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 PARD6GQ9BYG4 376 aaPredicted RBP9.96□□□□□ -0.82
USP6NL-206ENST00000609853 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 PSENENQ9NZ42 101 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 HSPB7Q9UBY9 170 aa9.96□□□□□ -0.82
USP6NL-206ENST00000609853 FAM90A9PA6NNJ1 464 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 RBFOX2O43251 390 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP6NL-206ENST00000609853 OR8U8P0C7N1 319 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 ADCYAP1P18509 176 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 GPR12P47775 334 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 RAB7AP51149 207 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 UBE2KP61086 200 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
USP6NL-206ENST00000609853 TNFRSF9Q07011 255 aa9.95□□□□□ -0.82
USP6NL-206ENST00000609853 MORN2Q502X0 79 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms