RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 IGHV3-7P01780 117 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 IL5P05113 134 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 AKR1C4P17516 323 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 PI3P19957 117 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 ANXA7P20073 488 aaKnown RBP15.19■□□□□ 0.02
SSBP4-212ENST00000601919 IL3RAP26951 378 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 ZNF134P52741 427 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 RND3P61587 244 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 PAX8Q06710 450 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 C4orf46Q504U0 113 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 PHLDA2Q53GA4 152 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 ZNF818PQ6ZRF7 136 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 VMO1Q7Z5L0 202 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 SGPP2Q8IWX5 399 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 WFDC11Q8NEX6 87 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 TMEM186Q96B77 213 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 AGMATQ9BSE5 352 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 SLC2A9Q9NRM0 540 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 RNF150Q9ULK6 438 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 AMMECR1Q9Y4X0 333 aaPredicted RBP15.19■□□□□ 0.02
SSBP4-212ENST00000601919 WNK2Q9Y3S1 2297 aa15.19■□□□□ 0.02
SSBP4-212ENST00000601919 CR1P17927 2039 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 TEX13DA0A0J9YY54 714 aaPredicted RBP15.18■□□□□ 0.02
SSBP4-212ENST00000601919 RNF212BA8MTL3 300 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 TATDN3Q17R31 274 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 TMEM249Q2WGJ8 235 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 LYG1Q8N1E2 194 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 BEND2Q8NDZ0 799 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 RTN4IP1Q8WWV3 396 aaPredicted RBP15.18■□□□□ 0.02
SSBP4-212ENST00000601919 S1PR3Q99500 378 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 IFI27L2Q9H2X8 130 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 SIRT7Q9NRC8 400 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 KCNIP3Q9Y2W7 256 aa15.18■□□□□ 0.02
SSBP4-212ENST00000601919 MED13LQ71F56 2210 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 A0A1W2PPE3 182 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 SLC31A2O15432 143 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 OR4E1P0C645 316 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 ANXA3P12429 323 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 COX7A1P24310 79 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 GLDNQ6ZMI3 551 aaPredicted RBP15.17■□□□□ 0.02
SSBP4-212ENST00000601919 LDLRAD3Q86YD5 345 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 PNKDQ8N490 385 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 DRAM1Q8N682 238 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 ADAD2Q8NCV1 583 aaKnown RBP15.17■□□□□ 0.02
SSBP4-212ENST00000601919 OR11H6Q8NGC7 330 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 ABHD14BQ96IU4 210 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 PCGF1Q9BSM1 259 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 BEX2Q9BXY8 128 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 BEX1Q9HBH7 125 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 HIF1ANQ9NWT6 349 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 ITPR2Q14571 2701 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 ABCA2Q9BZC7 2435 aa15.17■□□□□ 0.02
SSBP4-212ENST00000601919 CRYM-AS1A6NIL9 109 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 J3QLI3 93 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 MPPED1O15442 326 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 B3GALNT1O75752 331 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 IGHV4-31P0DP07 118 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 MMP9P14780 707 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 UTF1Q5T230 341 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 CYB5R2Q6BCY4 276 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 FAM71F2Q6NXP2 309 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 ZNF66Q6ZN08 573 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 KCTD9Q7L273 389 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 MSI2Q96DH6 328 aaKnown RBP15.16■□□□□ 0.02
SSBP4-212ENST00000601919 HSD17B10Q99714 261 aaKnown RBP15.16■□□□□ 0.02
SSBP4-212ENST00000601919 NAA60Q9H7X0 242 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 SDHAF2Q9NX18 166 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 AUP1Q9Y679 476 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 PDZD2O15018 2839 aa15.16■□□□□ 0.02
SSBP4-212ENST00000601919 SNRPGP15A8MWD9 76 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 CREBL2O60519 120 aaPredicted RBP15.15■□□□□ 0.02
SSBP4-212ENST00000601919 PGLYRP1O75594 196 aaPredicted RBP15.15■□□□□ 0.02
SSBP4-212ENST00000601919 TGFAP01135 160 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 IGLV2-14P01704 120 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 HLA-AP01891 365 aaKnown RBP15.15■□□□□ 0.02
SSBP4-212ENST00000601919 VSIG10L2P0DP72 767 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 VAMP1P23763 118 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 DHODHQ02127 395 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 CATR1Q13166 79 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 HLA-DRB5Q30154 266 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 LYG2Q86SG7 212 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 TBC1D26Q86UD7 250 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 MAPK1IP1LQ8NDC0 245 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 CAPSLQ8WWF8 208 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 TMEM230Q96A57 120 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 ADTRPQ96IZ2 230 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 C7orf69Q9H7B7 122 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 ITGB1BP2Q9UKP3 347 aa15.15■□□□□ 0.02
SSBP4-212ENST00000601919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.022e-9■■■■■ 28.4
SSBP4-212ENST00000601919 NBPF19A0A087WUL8 3843 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 SAA2-SAA4A0A096LPE2 208 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 PIGBOS1A0A0B4J2F0 54 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 IFNA2P01563 188 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 IGLV1-47P01700 117 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 ARG1P05089 322 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 SAA2P0DJI9 122 aaPredicted RBP15.14■□□□□ 0.01
SSBP4-212ENST00000601919 HOXB4P17483 251 aaPredicted RBP15.14■□□□□ 0.01
SSBP4-212ENST00000601919 CEACAM3P40198 252 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 UBE2E1P51965 193 aa15.14■□□□□ 0.01
SSBP4-212ENST00000601919 ZNF137PP52743 207 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms