RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MAB21L2Q9Y586 359 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 N6AMT1Q9Y5N5 214 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SNX5Q9Y5X3 404 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 R4GMQ9 66 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PLXNB1O43157 2135 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 TET2Q6N021 2002 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 NOTCH1P46531 2555 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 VWFP04275 2813 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGKV1D-17A0A075B6S4 117 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGHV3OR15-7A0A075B7D8 119 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 C13orf42A0A1B0GVH6 325 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A1W2PQL4 384 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 METTL15A6NJ78 407 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SNTNA6NMZ2 147 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RNASEK-C17orf49H0YIS7 233 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 J3QT63 122 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 EI24O14681 340 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 AKR7A2O43488 359 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 MPZL2O60487 215 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RHBDL1O75783 438 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RBP4P02753 201 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 KRT8P05787 483 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SFTPBP07988 381 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 MRPL3P09001 348 aaKnown RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 UBCP0CG48 685 aaKnown RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 GPM6AP51674 278 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 UBE2E1P51965 193 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SNU13P55769 128 aaKnown RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 CDC42P60953 191 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 ARF6P62330 175 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF85Q03923 595 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 IL24Q13007 206 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 MRPL28Q13084 256 aaKnown RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 AANATQ16613 207 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 DGUOKQ16854 277 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 DEFB112Q30KQ8 113 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SMIM21Q3B7S5 101 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 NHLRC3Q5JS37 347 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 BCL2L15Q5TBC7 163 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM244Q5VVB8 128 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 PLCXD3Q63HM9 321 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 NCR3LG1Q68D85 454 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 HAGHLQ6PII5 290 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 UTS2BQ765I0 119 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SSX6Q7RTT6 188 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 VMO1Q7Z5L0 202 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SYS1Q8N2H4 156 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 C11orf42Q8N5U0 333 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 FAM216BQ8N7L0 139 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 C3orf56Q8N813 242 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 YIPF7Q8N8F6 280 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR5D13Q8NGL4 314 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR2G2Q8NGZ5 317 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR4F5Q8NH21 305 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RHOXF1Q8NHV9 184 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 HAVCR2Q8TDQ0 301 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 PYDC1Q8WXC3 89 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 PP6455Q8WZ26 134 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RORBQ92753 470 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 LHX4Q969G2 390 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SEH1LQ96EE3 360 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RDH12Q96NR8 316 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 GAFA1Q96PS6 74 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 MBOAT4Q96T53 435 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 SSX3Q99909 188 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 APOL4Q9BPW4 351 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 NRIP2Q9BQI9 281 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF649Q9BS31 505 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 CHST5Q9GZS9 411 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 METTL8Q9H825 291 aaKnown RBP2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 RHOFQ9HBH0 211 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 CLEC5AQ9NY25 188 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 PIGLQ9Y2B2 252 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 FBXO7Q9Y3I1 522 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 ANK2Q01484 3957 aa2.71□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGKV1-27A0A075B6S5 117 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A0U1RQK1 487 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 MDFIC2A0A1B0GVS7 189 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A1B0GW55 424 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A1W2PRV1 198 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF320A2RRD8 509 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CLPSL1A2RUU4 121 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RFPL4AA6NLU0 287 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR4C45A6NMZ5 311 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 C17orf98A8MV24 154 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 RFPL4AL1F8VTS6 287 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 K7N7A8 449 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 M0R129 80 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 MAGEB4O15481 346 aaPredicted RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 SYNGR1O43759 233 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ENTPD6O75354 484 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF737O75373 536 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 GATBO75879 557 aaKnown RBP2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CLPXO76031 633 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 SERPINA3P01011 423 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 CRYBA1P05813 215 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 FBP1P09467 338 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4L2P0CJ85 424 aa2.7□□□□□ -1.98
CKS1BP3-201ENST00000600888 DUX4L3P0CJ86 424 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms