RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 C5orf30Q96GV9 206 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 NABP2Q9BQ15 211 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 SLC25A33Q9BSK2 321 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 MRPL20Q9BYC9 149 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 RDH8Q9NYR8 311 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 RNF114Q9Y508 228 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 IGKV1D-33P01593 117 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 IGKV1-33P01594 117 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 CD1BP29016 333 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 RORCP51449 518 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 ARHGDIBP52566 201 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 TMBIM6P55061 237 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 LSAMPQ13449 338 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 KIR2DS1Q14954 304 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 MOB3BQ86TA1 216 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 TGIF2LXQ8IUE1 241 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 GVQW1Q8N7I0 195 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 DTX3Q8N9I9 347 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 ABHD14BQ96IU4 210 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 EAF1Q96JC9 268 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 CMTM3Q96MX0 182 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 NPFFR1Q9GZQ6 430 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 PLSCR3Q9NRY6 295 aa15.53■□□□□ 0.08
SHKBP1-221ENST00000599833 TXNL1O43396 289 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 FAM106CPP0CH98 169 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 TAS2R20P59543 309 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 MRPS15P82914 257 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 PITPNAQ00169 270 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 RPL39P5Q59GN2 51 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 FAM71F2Q6NXP2 309 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 H1FOOQ8IZA3 346 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 C3orf56Q8N813 242 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 OR4C13Q8NGP0 309 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 RAB2BQ8WUD1 216 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 CITED1Q99966 193 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 BCL7BQ9BQE9 202 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 RBM38Q9H0Z9 239 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 COMMD3Q9UBI1 195 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 ANAPC10Q9UM13 185 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 CEPT1Q9Y6K0 416 aa15.52■□□□□ 0.08
SHKBP1-221ENST00000599833 SH2D7A6NKC9 451 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 HLA-DQB1P01920 261 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 ZNF182P17025 639 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 ELK1P19419 428 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 TALDO1P37837 337 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 GNG2P59768 71 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 C11orf88Q6PI97 169 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 C5orf56Q8N8D9 126 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 DYNC2LI1Q8TCX1 351 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 ACOT12Q8WYK0 555 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 SNAPC3Q92966 411 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 RITA1Q96K30 269 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 ST6GALNAC5Q9BVH7 336 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 WNT10AQ9GZT5 417 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 DIABLOQ9NR28 239 aa15.51■□□□□ 0.07
SHKBP1-221ENST00000599833 DNAH3Q8TD57 4116 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 RAB29O14966 203 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 BET1O15155 118 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 HPGDSO60760 199 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 APOA1P02647 267 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 CT45A6P0DMU7 189 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 CT45A5P0DMU8 189 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 CT45A7P0DMV0 189 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 TMEM95Q3KNT9 176 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 HOGA1Q86XE5 327 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 EDARADDQ8WWZ3 215 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 S100A16Q96FQ6 103 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 PIPOXQ9P0Z9 390 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 ANXA10Q9UJ72 324 aa15.5■□□□□ 0.07
SHKBP1-221ENST00000599833 H3BMQ9 156 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 HSPA12AO43301 675 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 TMEM11P17152 192 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 LINC00205P59089 165 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 HNF4GQ14541 408 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 Q8N9W7 124 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 ISOC1Q96CN7 298 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 PRSS22Q9GZN4 317 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 MIXL1Q9H2W2 232 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 RNF150Q9ULK6 438 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 GAB2Q9UQC2 676 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 MOB4Q9Y3A3 225 aa15.49■□□□□ 0.07
SHKBP1-221ENST00000599833 FBN3Q75N90 2809 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 FGF16O43320 207 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 TMEM69Q5SWH9 247 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 CNIH2Q6PI25 160 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 SHISA2Q6UWI4 295 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 OR2T10Q8NGZ9 312 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 OR10J5Q8NHC4 309 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 PHF21AQ96BD5 680 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 GHITMQ9H3K2 345 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 SCOCQ9UIL1 159 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 NBEAL1Q6ZS30 2694 aa15.48■□□□□ 0.07
SHKBP1-221ENST00000599833 TUSC2O75896 110 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 MOSP00540 346 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 NAT1P18440 290 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 F2RL1P55085 397 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 HES1Q14469 280 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 ABCA11PQ4W5N1 156 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 FAM71E2Q8N5Q1 922 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 OR5AN1Q8NGI8 311 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms