RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ZNF695Q8IW36 515 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 CREB3L1Q96BA8 519 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 SLC25A38Q96DW6 304 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 COQ2Q96H96 371 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 PECRQ9BY49 303 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 ABCG5Q9H222 651 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 OR6C3Q9NZP0 311 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 KIF25Q9UIL4 384 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 ADAM30Q9UKF2 790 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 TRAPPC2LQ9UL33 140 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 SERPINE3A8MV23 424 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 HPGDSO60760 199 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 APOA1P02647 267 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 CGB3P0DN86 165 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 CGB7P0DN87 165 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 RAB25P57735 213 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 HNF4GQ14541 408 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 DEFB136Q30KP8 78 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 CDNFQ49AH0 187 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 CASC10Q5T4H9 136 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 RSBN1Q5VWQ0 802 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 CCDC144NLQ6NUI1 221 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 ZNF565Q8N9K5 539 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 MCFD2Q8NI22 146 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 NCOR1P1Q9H4R4 102 aa12.92□□□□□ -0.34
SHKBP1-215ENST00000597649 TRAV18A0A075B6X5 111 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 A0A0A6YYH2 397 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 A0A1W2PPI3 338 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 A6NHS1 94 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 A6NJ64 397 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 FOXI3A8MTJ6 420 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 IGHV3-7P01780 117 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 IGHG2P01859 326 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 MT-ND4P03905 459 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 CD3GP09693 182 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 HIST1H1DP16402 221 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 GNB3P16520 340 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 GLP1RP43220 463 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 ARFRP1Q13795 201 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 PLAC9Q5JTB6 97 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 ZNF497Q6ZNH5 498 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 LCNL1Q6ZST4 164 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 OR4K15Q8NH41 348 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 CCDC107Q8WV48 283 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 LEAP2Q969E1 77 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 CMSS1Q9BQ75 279 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 RIMS4Q9H426 269 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 AK3Q9UIJ7 227 aa12.91□□□□□ -0.34
SHKBP1-215ENST00000597649 RPLP1P05386 114 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 EIF4EP06730 217 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 NFYBP25208 207 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 TALDO1P37837 337 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 ECI1P42126 302 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 PAX5Q02548 391 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 TMEM69Q5SWH9 247 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 STPG2Q8N412 459 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 OR9G1Q8NH87 305 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 MUC7Q8TAX7 377 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 MRGPRDQ8TDS7 321 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 TOMM40LQ969M1 308 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 RPEQ96AT9 228 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 KIRREL1Q96J84 757 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
SHKBP1-215ENST00000597649 TRAV39A0A0B4J263 110 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 ZNF729A6NN14 1252 aaPredicted RBP12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 J3QR06 171 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 CTDSP2O14595 271 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 FGF16O43320 207 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 XRCC3O43542 346 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 GSTP1P09211 210 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 TMEM11P17152 192 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 ELK1P19419 428 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 GZMHP20718 246 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 GNG2P59768 71 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 HES1Q14469 280 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 TRAT1Q6PIZ9 186 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 IZUMO1Q8IYV9 350 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 COMMD1Q8N668 190 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 OR13A1Q8NGR1 328 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 RAB9BQ9NP90 201 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 C12orf4Q9NQ89 552 aa12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-215ENST00000597649 MFNGO00587 321 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 S100A5P33763 92 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 SLC35B1P78383 322 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 PITPNAQ00169 270 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 KIR2DS1Q14954 304 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 PNLIPRP3Q17RR3 467 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 C9orf66Q5T8R8 295 aa12.88□□□□□ -0.35
SHKBP1-215ENST00000597649 MRPL30Q8TCC3 161 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms