RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 AMMECR1Q9Y4X0 333 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-214ENST00000592186 CREBBPQ92793 2442 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 IGHV3-43A0A0B4J1X8 118 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 NAP1L6A6NFF2 107 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 RNASEK-C17orf49H0YIS7 233 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 LANCL1O43813 399 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 AVPP01185 164 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 IGLV1-47P01700 117 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 ARG1P05089 322 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 IGHV3-43DP0DP04 118 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 HOXB4P17483 251 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 COX7A1P24310 79 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 IL3RAP26951 378 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 HTR1DP28221 377 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 PPP1CCP36873 323 aaKnown RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 KLF9Q13886 244 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 PLA1AQ53H76 456 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 CT45A1Q5HYN5 189 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 FAM120AOSQ5T036 256 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 MINOS1Q5TGZ0 78 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 ZNF626Q68DY1 528 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 LPCAT3Q6P1A2 487 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 SLC25A48Q6ZT89 311 aaKnown RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 ZNF439Q8NDP4 499 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 OR10V1Q8NGI7 309 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 OR10X1Q8NGY0 326 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 CT45A3Q8NHU0 189 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 MALSU1Q96EH3 234 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 PRRT1Q99946 306 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 MMP28Q9H239 520 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 PIPOXQ9P0Z9 390 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 OR1A1Q9P1Q5 309 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 GAB2Q9UQC2 676 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 TBL2Q9Y4P3 447 aaKnown RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 RBM7Q9Y580 266 aaKnown RBP8.7□□□□□ -1.02
SMAD4-214ENST00000592186 MINOS1-NBL1R4GNA1 71 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 DOCK11Q5JSL3 2073 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 VPS13CQ709C8 3753 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 AKAP9Q99996 3911 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 CELSR1Q9NYQ6 3014 aa8.7□□□□□ -1.02
SMAD4-214ENST00000592186 FLNAP21333 2647 aaKnown RBP8.69□□□□□ -1.02
SMAD4-214ENST00000592186 LEUTXA8MZ59 168 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 OOSP1A8MZH6 123 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 RAB29O14966 203 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 NPFFO15130 113 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 TUSC2O75896 110 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 C1QBP02746 253 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 AMY2AP04746 511 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 EPHA1P21709 976 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 ECI1P42126 302 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 LUMP51884 338 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-214ENST00000592186 HERV-K104P61576 105 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 GNMTQ14749 295 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 TOR2AQ5JU69 321 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 HCP5Q6MZN7 132 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-214ENST00000592186 C5orf24Q7Z6I8 188 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 TERB2Q8NHR7 220 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 LEAP2Q969E1 77 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 ABHD14AQ9BUJ0 271 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 BEX2Q9BXY8 128 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 C11orf54Q9H0W9 315 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-214ENST00000592186 DPM3Q9P2X0 92 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 CDC42EP3Q9UKI2 254 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 CR1P17927 2039 aa8.69□□□□□ -1.02
SMAD4-214ENST00000592186 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 BUB1B-PAK6H3BSN5 160 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 M0QYG6 137 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 FSHBP01225 129 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 PPYP01298 95 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 OR8U9P0C7N5 309 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 SPNP16150 400 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 NFYAP23511 347 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 SRP14P37108 136 aaKnown RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 GNG10P50151 68 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 ARHGDIBP52566 201 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 ZNF134P52741 427 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 MSMO1Q15800 293 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 HLA-DRB5Q30154 266 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 KLF17Q5JT82 389 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 ZNF660Q6AZW8 331 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 CCDC144NLQ6NUI1 221 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 MZT2BQ6NZ67 158 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 C9orf139Q6ZV77 190 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 OR8U1Q8NH10 309 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 MOB3AQ96BX8 217 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 SCGB3A2Q96PL1 93 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 S1PR3Q99500 378 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 SMR3AQ99954 134 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 AGMATQ9BSE5 352 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 TINAGL1Q9GZM7 467 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 MS4A7Q9GZW8 240 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-214ENST00000592186 HRASLSQ9HDD0 168 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 SLC2A8Q9NY64 477 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 FAM96BQ9Y3D0 163 aa8.68□□□□□ -1.02
SMAD4-214ENST00000592186 ZANQ9Y493 2812 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms