RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 FAM186AA6NE01 2351 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 ELOA3CA0A087WX78 387 aaPredicted RBP14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 MAP1LC3B2A6NCE7 125 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 CEBPZOSA8MTT3 80 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 TRGC1P0CF51 173 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 ZNF146Q15072 292 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 OR2B11Q5JQS5 317 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 ATP1A1-AS1Q5TC04 95 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 GFI1BQ5VTD9 330 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 HIST3H2BBQ8N257 126 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 MDS2Q8NDY4 140 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 NANOS1Q8WY41 292 aaKnown RBP14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 FRZBQ92765 325 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 MAP1LC3BQ9GZQ8 125 aa14.22□□□□□ -0.13
PRKCSH-205ENST00000587327 MED12LQ86YW9 2145 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 TGOLN2O43493 480 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 IFNA1P01562 189 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 ELLP55199 621 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 SLC38A11Q08AI6 406 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 FBXW9Q5XUX1 488 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 WDR25Q64LD2 544 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 TMEM14EPQ6UXP3 125 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 OR10D4PQ8NGN7 298 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 RBKSQ9H477 322 aa14.21□□□□□ -0.13
PRKCSH-205ENST00000587327 PCNX2A6NKB5 2137 aa14.21□□□□□ -0.14
PRKCSH-205ENST00000587327 TRBV24-1A0A075B6N3 115 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 ZNF729A6NN14 1252 aaPredicted RBP14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 RNF212BA8MTL3 300 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 SH2D1BO14796 132 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 ZNF737O75373 536 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 MEOX1P50221 254 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 TNFRSF9Q07011 255 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 RPP25LQ8N5L8 163 aaKnown RBP14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 CTDSP1Q9GZU7 261 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 TTC28Q96AY4 2481 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 UBE2L5PA0A1B0GUS4 154 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 CDIPTO14735 213 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 NXPH2O95156 264 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 OPN1MWP04001 364 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 SP1P08047 785 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 PGA5P0DJD9 388 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 OPN1MW2P0DN77 364 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 OPN1MW3P0DN78 364 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 BEND4Q6ZU67 534 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 VASH2Q86V25 355 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 LHX4Q969G2 390 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 SLC39A9Q9NUM3 307 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 TIMM9Q9Y5J7 89 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 ARHGAP21Q5T5U3 1957 aa14.2□□□□□ -0.14
PRKCSH-205ENST00000587327 PHOX2AO14813 284 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 RD3LP0DJH9 198 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 TBC1D28Q2M2D7 210 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 OR8G2PQ6IF36 304 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 CDPF1Q6NVV7 123 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 FAM180AQ6UWF9 173 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 CENPVQ7Z7K6 275 aaPredicted RBP14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 FER1L6-AS2Q96M78 137 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 SSX3Q99909 188 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 CACNA1HO95180 2353 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 J3QW42 95 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 PTBP3O95758 552 aaKnown RBP14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 CLDN1O95832 211 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 IGKV1D-33P01593 117 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 IGKV1-33P01594 117 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 CD81P60033 236 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 TRIP6Q15654 476 aaKnown RBP14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 PDZD11Q5EBL8 140 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 ZNF383Q8NA42 475 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 AGMATQ9BSE5 352 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 OR2J1Q9GZK6 312 aa14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 KLF13Q9Y2Y9 288 aaPredicted RBP14.19□□□□□ -0.14
PRKCSH-205ENST00000587327 GATCO43716 136 aaKnown RBP14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 RAMP3O60896 148 aa14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 MEF2BQ02080 365 aaPredicted RBP14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 SLC10A1Q14973 349 aa14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 MYPOPQ86VE0 399 aaPredicted RBP14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 ZNF645Q8N7E2 425 aa14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 NAT8Q9UHE5 227 aa14.18□□□□□ -0.14
PRKCSH-205ENST00000587327 OR5H1A6NKK0 313 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 SMPD2O60906 423 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 PPP1CBP62140 327 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 C4orf17Q53FE4 359 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 ZBTB34Q8NCN2 500 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 SMIM7Q9BQ49 75 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 CHD3Q12873 2000 aaKnown RBP14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 KLRC4-KLRK1H3BQV0 150 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 KRASP01116 189 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 CELA3BP08861 270 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 MRPL49Q13405 166 aaKnown RBP14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 PFDN5Q99471 154 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 KCNIP1Q9NZI2 227 aa14.17□□□□□ -0.14
PRKCSH-205ENST00000587327 IGHV3-64DA0A0J9YX35 117 aa14.16□□□□□ -0.14
PRKCSH-205ENST00000587327 PSPNO60542 156 aa14.16□□□□□ -0.14
PRKCSH-205ENST00000587327 CD55P08174 381 aa14.16□□□□□ -0.14
PRKCSH-205ENST00000587327 P0C879 139 aa14.16□□□□□ -0.14
PRKCSH-205ENST00000587327 HIST1H1BP16401 226 aaKnown RBP14.16□□□□□ -0.14
PRKCSH-205ENST00000587327 G6PCP35575 357 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms