RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 FOXL1Q12952 345 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 HNF4GQ14541 408 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 C12orf54Q6X4T0 127 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 LIAT1Q6ZQX7 453 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 BEST4Q8NFU0 473 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 CFHR4Q92496 578 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 RBMXL1Q96E39 390 aaKnown RBP17.2■□□□□ 0.34
RETREG3-204ENST00000586796 RBM38Q9H0Z9 239 aaKnown RBP17.2■□□□□ 0.34
RETREG3-204ENST00000586796 IFT46Q9NQC8 304 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 EXTL2Q9UBQ6 330 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 ANXA10Q9UJ72 324 aa17.2■□□□□ 0.34
RETREG3-204ENST00000586796 J3QRK9 145 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 LANCL1O43813 399 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 IGKV1D-33P01593 117 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 IGKV1-33P01594 117 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 HLA-DQB1P01920 261 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 MDKP21741 143 aaPredicted RBP17.19■□□□□ 0.34
RETREG3-204ENST00000586796 PRSS3P35030 304 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 ARPC4P59998 168 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 AWAT1Q58HT5 328 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 RPL39P5Q59GN2 51 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 Q6ZSV7 163 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 HOGA1Q86XE5 327 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 DCUN1D5Q9BTE7 237 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 C6orf62Q9GZU0 229 aaPredicted RBP17.19■□□□□ 0.34
RETREG3-204ENST00000586796 PIPOXQ9P0Z9 390 aa17.19■□□□□ 0.34
RETREG3-204ENST00000586796 RBM7Q9Y580 266 aaKnown RBP17.19■□□□□ 0.34
RETREG3-204ENST00000586796 FAM90A9PA6NNJ1 464 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 ZNF736B4DX44 427 aaPredicted RBP17.18■□□□□ 0.34
RETREG3-204ENST00000586796 ITGB1BP1O14713 200 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 RAB29O14966 203 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 TXNL1O43396 289 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 OR8U9P0C7N5 309 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 CBX5P45973 191 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 CNIH2Q6PI25 160 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 LAX1Q8IWV1 398 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 OR8U1Q8NH10 309 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 OR4F5Q8NH21 305 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 AGMATQ9BSE5 352 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 SLC25A33Q9BSK2 321 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 MRPL20Q9BYC9 149 aaKnown RBP17.18■□□□□ 0.34
RETREG3-204ENST00000586796 MIXL1Q9H2W2 232 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 ZNF221Q9UK13 617 aa17.18■□□□□ 0.34
RETREG3-204ENST00000586796 NDUFA7O95182 113 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 CTXN2P0C2S0 81 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 TMEM11P17152 192 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 NFYAP23511 347 aaPredicted RBP17.17■□□□□ 0.34
RETREG3-204ENST00000586796 GPR12P47775 334 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 RNASE12Q5GAN4 147 aaKnown RBP17.17■□□□□ 0.34
RETREG3-204ENST00000586796 ZNF833PQ6ZTB9 187 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 THNSL2Q86YJ6 484 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 H1FOOQ8IZA3 346 aaPredicted RBP17.17■□□□□ 0.34
RETREG3-204ENST00000586796 S1PR3Q99500 378 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 NPFFR1Q9GZQ6 430 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 SLIRPQ9GZT3 109 aaKnown RBP17.17■□□□□ 0.34
RETREG3-204ENST00000586796 BEX1Q9HBH7 125 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 ADAM30Q9UKF2 790 aa17.17■□□□□ 0.34
RETREG3-204ENST00000586796 DIRAS3O95661 229 aa17.16■□□□□ 0.34
RETREG3-204ENST00000586796 OR4C13Q8NGP0 309 aa17.16■□□□□ 0.34
RETREG3-204ENST00000586796 MCFD2Q8NI22 146 aa17.16■□□□□ 0.34
RETREG3-204ENST00000586796 SNAPC3Q92966 411 aa17.16■□□□□ 0.34
RETREG3-204ENST00000586796 RBM14Q96PK6 669 aaKnown RBP17.16■□□□□ 0.34
RETREG3-204ENST00000586796 TOLLIPQ9H0E2 274 aa17.16■□□□□ 0.34
RETREG3-204ENST00000586796 OR2D2Q9H210 308 aa17.16■□□□□ 0.34
RETREG3-204ENST00000586796 OR2F2O95006 317 aa17.15■□□□□ 0.34
RETREG3-204ENST00000586796 HABP2Q14520 560 aaPredicted RBP17.15■□□□□ 0.34
RETREG3-204ENST00000586796 GLDNQ6ZMI3 551 aaPredicted RBP17.15■□□□□ 0.34
RETREG3-204ENST00000586796 EAF1Q96JC9 268 aaPredicted RBP17.15■□□□□ 0.34
RETREG3-204ENST00000586796 AKR1E2Q96JD6 320 aa17.15■□□□□ 0.34
RETREG3-204ENST00000586796 NABP2Q9BQ15 211 aa17.15■□□□□ 0.34
RETREG3-204ENST00000586796 ZNF251Q9BRH9 671 aa17.15■□□□□ 0.34
RETREG3-204ENST00000586796 SIGLEC9Q9Y336 463 aa17.15■□□□□ 0.34
RETREG3-204ENST00000586796 TSPAN9O75954 239 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 CD1BP29016 333 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 COMPP49747 757 aaPredicted RBP17.14■□□□□ 0.33
RETREG3-204ENST00000586796 BLCAPP62952 87 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 LSAMPQ13449 338 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 C16orf82Q7Z2V1 217 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 C3orf56Q8N813 242 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 DRAXINQ8NBI3 349 aaPredicted RBP17.14■□□□□ 0.33
RETREG3-204ENST00000586796 OR2T10Q8NGZ9 312 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 SPATA3Q8NHX4 192 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 LINC01006Q8NI28 216 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 GHITMQ9H3K2 345 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 NECAP2Q9NVZ3 263 aa17.14■□□□□ 0.33
RETREG3-204ENST00000586796 CLPSL1A2RUU4 121 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 DPPA5A6NC42 116 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 SH2D7A6NKC9 451 aaPredicted RBP17.13■□□□□ 0.33
RETREG3-204ENST00000586796 ZNF701M0R085 212 aaPredicted RBP17.13■□□□□ 0.33
RETREG3-204ENST00000586796 HAX1O00165 279 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 CT45A6P0DMU7 189 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 CT45A5P0DMU8 189 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 CT45A7P0DMV0 189 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 ARSJQ5FYB0 599 aaPredicted RBP17.13■□□□□ 0.33
RETREG3-204ENST00000586796 FAM71F2Q6NXP2 309 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 GPX8Q8TED1 209 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 DIRAS2Q96HU8 199 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 RNF114Q9Y508 228 aa17.13■□□□□ 0.33
RETREG3-204ENST00000586796 NCBP2LA6PVI3 153 aaKnown RBP17.12■□□□□ 0.33
RETREG3-204ENST00000586796 M0R1X1 148 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms