RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CD3DP04234 171 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 FCER2P06734 321 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 RCC1P18754 421 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-225ENST00000569245 FAUP35544 74 aaKnown RBP11.68□□□□□ -0.54
COMMD4-225ENST00000569245 MEF2DQ14814 521 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 HMGN3Q15651 99 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 C6orf183Q5T699 404 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 POC5Q8NA72 575 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 PIFOQ8TCI5 191 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 CCDC107Q8WV48 283 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 C11orf54Q9H0W9 315 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-225ENST00000569245 LINC00854A0A1B0GVQ3 168 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 FABP7O15540 132 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 DIRAS3O95661 229 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 RAB3DO95716 219 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 GSTT2P0CG29 244 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 GZMHP20718 246 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 HRH1P35367 487 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 PRRX1P54821 245 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 HLA-DRB3P79483 266 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 LTC4SQ16873 150 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 PRR31Q5SQ13 230 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 MZT2BQ6NZ67 158 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 OVCH2Q7RTZ1 564 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 TMEM219Q86XT9 240 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 OR4C16Q8NGL9 310 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 OR4A4PQ8NGN8 299 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 OR13A1Q8NGR1 328 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 OR5H2Q8NGV7 314 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 NPFFR1Q9GZQ6 430 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 KCNIP1Q9NZI2 227 aa11.67□□□□□ -0.54
COMMD4-225ENST00000569245 TRAV39A0A0B4J263 110 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 C12orf77C9JDV5 145 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 PTTG1O95997 202 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 PMP2P02689 132 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 CGB3P0DN86 165 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 CGB7P0DN87 165 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 OR3A3P47888 321 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 PROK1P58294 105 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 ARPC4P59998 168 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 CDK10Q15131 360 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 C17orf58Q2M2W7 97 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 RGS21Q2M5E4 152 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 RNASE10Q5GAN6 216 aaKnown RBP11.66□□□□□ -0.54
COMMD4-225ENST00000569245 OR4D10Q8NGI6 311 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 OR2T6Q8NHC8 308 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 TINAGL1Q9GZM7 467 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-225ENST00000569245 TAF9BQ9HBM6 251 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 DPM3Q9P2X0 92 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 TCF19Q9Y242 345 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
COMMD4-225ENST00000569245 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 DISC1C4P0D8 188 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 C15orf65H3BRN8 121 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 M0QYG6 137 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 CHST1O43916 411 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 SCTP09683 121 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 BTCP35070 178 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 CEACAM3P40198 252 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 RFX2P48378 723 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 KRTAP10-3P60369 221 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 ARRDC1Q8N5I2 433 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 RFESDQ8TAC1 157 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 CREB3L1Q96BA8 519 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 CITED1Q99966 193 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 LINC00574Q9H8X3 128 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 IDI2-AS1Q9NZ38 188 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 PKD1L1Q8TDX9 2849 aa11.65□□□□□ -0.54
COMMD4-225ENST00000569245 IGKV1-6A0A0C4DH72 117 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 A6NDX4 124 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 NPIPB11E5RHQ5 1161 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 TIMM23O14925 209 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 IGHV3-7P01780 117 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 AMY2AP04746 511 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 IFNA6P05013 189 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 OR5H8P0DN80 308 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 SLC6A1P30531 599 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 DYNLT3P51808 116 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 HERPUD1Q15011 391 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 FAAP20Q6NZ36 180 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 CCBE1Q6UXH8 406 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-225ENST00000569245 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 LEAP2Q969E1 77 aa11.64□□□□□ -0.55
COMMD4-225ENST00000569245 KIRREL1Q96J84 757 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms