RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 GNMTQ14749 295 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 C1QL4Q86Z23 238 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 OR4A4PQ8NGN8 299 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 NABP2Q9BQ15 211 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 IFI27L2Q9H2X8 130 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 AK3Q9UIJ7 227 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
USB1-211ENST00000565662 LDLRAD4O15165 306 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 TMEM127O75204 238 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 SPDEFO95238 335 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 IGHG4P01861 327 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 FGF9P31371 208 aaPredicted RBP13.2□□□□□ -0.3
USB1-211ENST00000565662 ACTBP60709 375 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 SRSF7Q16629 238 aaKnown RBP eCLIP13.2□□□□□ -0.3
USB1-211ENST00000565662 C2orf76Q3KRA6 126 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 ZNF329Q86UD4 541 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 TPRA1Q86W33 373 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 ZNF695Q8IW36 515 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 ODF3L1Q8IXM7 274 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 NPBQ8NG41 125 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 RAB3CQ96E17 227 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 PECRQ9BY49 303 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 Q9N2K0 584 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 PLSCR3Q9NRY6 295 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 ZNF221Q9UK13 617 aa13.2□□□□□ -0.3
USB1-211ENST00000565662 A0A0A6YYD4 124 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 SH2D7A6NKC9 451 aaPredicted RBP13.19□□□□□ -0.3
USB1-211ENST00000565662 SOCS1O15524 211 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 NDUFA3O95167 84 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 APOA2P02652 100 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 CDX1P47902 265 aaPredicted RBP13.19□□□□□ -0.3
USB1-211ENST00000565662 THBS3P49746 956 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 SCAND1P57086 179 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 CBX3Q13185 183 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 SSX1Q16384 188 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 KLHL30-AS1Q8NEE0 82 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 ARHGAP5-AS1Q96IT6 56 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 NOL4LQ96MY1 436 aaPredicted RBP13.19□□□□□ -0.3
USB1-211ENST00000565662 GFI1Q99684 422 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 MRPL20Q9BYC9 149 aaKnown RBP13.19□□□□□ -0.3
USB1-211ENST00000565662 TOLLIPQ9H0E2 274 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 RNF150Q9ULK6 438 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 WASHC3Q9Y3C0 194 aa13.19□□□□□ -0.3
USB1-211ENST00000565662 TMEM272A0A1B0GTI8 110 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 TRDCB7Z8K6 153 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 C5orf64Q2M2E5 130 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 PYHIN1Q6K0P9 492 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 LINC00482Q8N8I6 264 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 OR10R2Q8NGX6 335 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 STUB1Q9UNE7 303 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 SSR3Q9UNL2 185 aa13.18□□□□□ -0.3
USB1-211ENST00000565662 NOTOA8MTQ0 251 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 GSTP1P09211 210 aaKnown RBP13.17□□□□□ -0.3
USB1-211ENST00000565662 PSMB9P28065 219 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 TALDO1P37837 337 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 CEACAM6P40199 344 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 TMEM50BP56557 158 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 PITPNAQ00169 270 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 TMEM267Q0VDI3 215 aaPredicted RBP13.17□□□□□ -0.3
USB1-211ENST00000565662 PLGLAQ15195 96 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 OXLD1Q5BKU9 147 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 HES5Q5TA89 166 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 ZNF660Q6AZW8 331 aaPredicted RBP13.17□□□□□ -0.3
USB1-211ENST00000565662 LIN54Q6MZP7 749 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 TMEM65Q6PI78 240 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 Q6ZS49 121 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 PDPNQ86YL7 162 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 TSNAXQ99598 290 aaKnown RBP13.17□□□□□ -0.3
USB1-211ENST00000565662 CABLES2Q9BTV7 478 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 OR51J1Q9H342 316 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 KCNK15Q9H427 330 aa13.17□□□□□ -0.3
USB1-211ENST00000565662 ST8SIA5O15466 376 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 FABP7O15540 132 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
USB1-211ENST00000565662 DTYMKP23919 212 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 CD40LGP29965 261 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 CLDN12P56749 244 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 TIMM50Q3ZCQ8 353 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 SPARTQ8N0X7 666 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 OR5AN1Q8NGI8 311 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 OR10J5Q8NHC4 309 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 AGMATQ9BSE5 352 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.16□□□□□ -0.3
USB1-211ENST00000565662 GAB2Q9UQC2 676 aa13.16□□□□□ -0.3
USB1-211ENST00000565662 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
USB1-211ENST00000565662 H0YJW9 148 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 H7C2Y5 167 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 MFNGO00587 321 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 RRHO14718 337 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 TFAP2AP05549 437 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 FCGR3AP08637 254 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 CTXN2P0C2S0 81 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 PSMB8P28062 276 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 CRIP2P52943 208 aaPredicted RBP13.15□□□□□ -0.3
USB1-211ENST00000565662 F2RL1P55085 397 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 CFHR3Q02985 330 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms