RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 STEAP1Q9UHE8 339 aa13.01□□□□□ -0.33
CCNF-203ENST00000564236 SLC23A1Q9UHI7 598 aa13.01□□□□□ -0.33
CCNF-203ENST00000564236 VSIG4Q9Y279 399 aa13.01□□□□□ -0.33
CCNF-203ENST00000564236 A0A0A6YYD4 124 aa13□□□□□ -0.33
CCNF-203ENST00000564236 TRAV41A0A0B4J266 112 aa13□□□□□ -0.33
CCNF-203ENST00000564236 OR5H14A6NHG9 310 aa13□□□□□ -0.33
CCNF-203ENST00000564236 FOXI3A8MTJ6 420 aaPredicted RBP13□□□□□ -0.33
CCNF-203ENST00000564236 RAB9AP51151 201 aa13□□□□□ -0.33
CCNF-203ENST00000564236 RAB25P57735 213 aa13□□□□□ -0.33
CCNF-203ENST00000564236 HSD17B12Q53GQ0 312 aa13□□□□□ -0.33
CCNF-203ENST00000564236 RBM48Q5RL73 367 aaKnown RBP13□□□□□ -0.33
CCNF-203ENST00000564236 ZNF660Q6AZW8 331 aaPredicted RBP13□□□□□ -0.33
CCNF-203ENST00000564236 TCTEX1D1Q8N7M0 179 aa13□□□□□ -0.33
CCNF-203ENST00000564236 OR5AN1Q8NGI8 311 aa13□□□□□ -0.33
CCNF-203ENST00000564236 RNF5Q99942 180 aa13□□□□□ -0.33
CCNF-203ENST00000564236 NICN1Q9BSH3 213 aa13□□□□□ -0.33
CCNF-203ENST00000564236 TMED9Q9BVK6 235 aa13□□□□□ -0.33
CCNF-203ENST00000564236 LPAR5Q9H1C0 372 aa13□□□□□ -0.33
CCNF-203ENST00000564236 VCXQ9H320 206 aa13□□□□□ -0.33
CCNF-203ENST00000564236 GNB4Q9HAV0 340 aa13□□□□□ -0.33
CCNF-203ENST00000564236 MGAT4AQ9UM21 535 aa13□□□□□ -0.33
CCNF-203ENST00000564236 NBEAL2Q6ZNJ1 2754 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 CT45A6P0DMU7 189 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 CT45A5P0DMU8 189 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 CT45A7P0DMV0 189 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 BLVRBP30043 206 aaPredicted RBP12.99□□□□□ -0.33
CCNF-203ENST00000564236 MC5RP33032 325 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 NDPQ00604 133 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 ZNF616Q08AN1 781 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 TMEM65Q6PI78 240 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 CEACAM19Q7Z692 300 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 PTX4Q96A99 478 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 KIAA1456Q9P272 454 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 HSF4Q9ULV5 492 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 WSB1Q9Y6I7 421 aa12.99□□□□□ -0.33
CCNF-203ENST00000564236 H0YJW9 148 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 SLC17A2O00624 439 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 RRHO14718 337 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 ST8SIA5O15466 376 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 RBBP9O75884 186 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 TPBGQ13641 420 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 CD200R1LQ6Q8B3 271 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 FAM131AQ6UXB0 335 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 TMEM91Q6ZNR0 172 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 OR1N2Q8NGR9 330 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 IL1F10Q8WWZ1 152 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 GFI1Q99684 422 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 DUSP21Q9H596 190 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 ISYNA1Q9NPH2 558 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 PARP11Q9NR21 331 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 TPSG1Q9NRR2 321 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 PLEKHJ1Q9NW61 149 aa12.98□□□□□ -0.33
CCNF-203ENST00000564236 PTGES3LE9PB15 166 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 SOX15O60248 233 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 EGR2P11161 476 aaPredicted RBP12.97□□□□□ -0.33
CCNF-203ENST00000564236 GNB1P62873 340 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 CX3CL1P78423 397 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 ZNF260Q3ZCT1 412 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 EDARADDQ8WWZ3 215 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 UFD1Q92890 307 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
CCNF-203ENST00000564236 KCNK15Q9H427 330 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 SCN3BQ9NY72 215 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 ZNF256Q9Y2P7 627 aaPredicted RBP12.97□□□□□ -0.33
CCNF-203ENST00000564236 FBXO7Q9Y3I1 522 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
CCNF-203ENST00000564236 SOCS1O15524 211 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 PROP1O75360 226 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 ARSBP15848 533 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 ZBTB25P24278 435 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 PSMA1P25786 263 aaKnown RBP12.96□□□□□ -0.33
CCNF-203ENST00000564236 ECI1P42126 302 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 TMEM50BP56557 158 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 HLA-DRB3P79483 266 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 MED22Q15528 200 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 TRAM1Q15629 374 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 ZNF429Q86V71 674 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 PRR25Q96S07 402 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 PARP12Q9H0J9 701 aaKnown RBP12.96□□□□□ -0.33
CCNF-203ENST00000564236 Q9N2K0 584 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 C12orf4Q9NQ89 552 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 AK3Q9UIJ7 227 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 FOXA2Q9Y261 457 aaPredicted RBP12.96□□□□□ -0.33
CCNF-203ENST00000564236 WASHC3Q9Y3C0 194 aa12.96□□□□□ -0.33
CCNF-203ENST00000564236 RYR3Q15413 4870 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 SPDEFO95238 335 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 AKIRIN2Q53H80 203 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 LIPKQ5VXJ0 399 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 PYHIN1Q6K0P9 492 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 ZNF562Q6V9R5 426 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 C11orf54Q9H0W9 315 aaPredicted RBP12.95□□□□□ -0.34
CCNF-203ENST00000564236 CHMP1AQ9HD42 196 aaPredicted RBP12.95□□□□□ -0.34
CCNF-203ENST00000564236 U3KQK5 164 aa12.95□□□□□ -0.34
CCNF-203ENST00000564236 FCN1O00602 326 aa12.94□□□□□ -0.34
CCNF-203ENST00000564236 LDLRAD4O15165 306 aa12.94□□□□□ -0.34
CCNF-203ENST00000564236 LGALS1P09382 135 aaKnown RBP12.94□□□□□ -0.34
CCNF-203ENST00000564236 CPEP16870 476 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms