RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 EDDM3BP56851 147 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 BRWD1-AS2P59051 145 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 CLINT1Q14677 625 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 EIF5AL1Q6IS14 154 aaKnown RBP15.9■□□□□ 0.14
SMPD3-203ENST00000563226 DEFB108BQ8NET1 73 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 SH3BGRL3Q9H299 93 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 PSG11Q9UQ72 335 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 ID4P47928 161 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 CCL8P80075 99 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 HTD2P86397 168 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 AKR1C1Q04828 323 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 TRAT1Q6PIZ9 186 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 ZBTB34Q8NCN2 500 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 PPP1R35Q8TAP8 253 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 VKORC1Q9BQB6 163 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 GINS3Q9BRX5 216 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 MS4A7Q9GZW8 240 aaPredicted RBP15.9■□□□□ 0.14
SMPD3-203ENST00000563226 COQ3Q9NZJ6 369 aa15.9■□□□□ 0.14
SMPD3-203ENST00000563226 TANC2Q9HCD6 1990 aa15.89■□□□□ 0.14
SMPD3-203ENST00000563226 BORCS7-ASMTA0A0B4J1R7 106 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 RNF212BA8MTL3 300 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 WRBO00258 174 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 CST7O76096 145 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 TNFSF4P23510 183 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 SRSF3P84103 164 aaKnown RBP15.89■□□□□ 0.13
SMPD3-203ENST00000563226 STUMQ69YW2 141 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 AGMATQ9BSE5 352 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 HRH4Q9H3N8 390 aa15.89■□□□□ 0.13
SMPD3-203ENST00000563226 C17orf98A8MV24 154 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 H3BP45 60 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 ZNF816Q0VGE8 651 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-203ENST00000563226 UTF1Q5T230 341 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 FGFRL1Q8N441 504 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 HSD17B11Q8NBQ5 300 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 SAT2Q96F10 170 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-203ENST00000563226 NUP50Q9UKX7 468 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 RELNP78509 3460 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 RAB19A4D1S5 217 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 IGHV3-7P01780 117 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 ADH4P08319 380 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 MMP9P14780 707 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 CR1LQ2VPA4 569 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 Q3ZCU0 254 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 Q8TCH9 128 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 GAFA1Q96PS6 74 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 TMA7Q9Y2S6 64 aaKnown RBP15.88■□□□□ 0.13
SMPD3-203ENST00000563226 RFNGQ9Y644 331 aa15.88■□□□□ 0.13
SMPD3-203ENST00000563226 LINC00473A8K010 186 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 GYPAP02724 150 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 SPP1P10451 314 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 GZMHP20718 246 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 DYNLT3P51808 116 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 TMEM217Q8N7C4 229 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 OR5C1Q8NGR4 320 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 TCTEX1D2Q8WW35 142 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 NARS2Q96I59 477 aaKnown RBP15.87■□□□□ 0.13
SMPD3-203ENST00000563226 SLC25A31Q9H0C2 315 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 MMP26Q9NRE1 261 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 PIGBOS1A0A0B4J2F0 54 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 C17orf100A8MU93 164 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 S1PR2O95136 353 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 LOXL3P58215 753 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 Q6ZRG5 221 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 SPAG16Q8N0X2 631 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 ZNF561Q8N587 486 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 FAM216BQ8N7L0 139 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 NEUROG1Q92886 237 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 C14orf79Q96F83 325 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 SDSLQ96GA7 329 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 CCL13Q99616 98 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 GNG12Q9UBI6 72 aa15.87■□□□□ 0.13
SMPD3-203ENST00000563226 POLEQ07864 2286 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 SEC11BP0C7V7 166 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 IAPPP10997 89 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 G6PCP35575 357 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 MORN2Q502X0 79 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 TMEM231Q9H6L2 316 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 CALYQ9NYX4 217 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 SPTA1P02549 2419 aa15.86■□□□□ 0.13
SMPD3-203ENST00000563226 PROP1O75360 226 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 CLDN1O95832 211 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 CGB3P0DN86 165 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 CGB7P0DN87 165 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 CATR1Q13166 79 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 MSMO1Q15800 293 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 BTNL8Q6UX41 500 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 DMRTC2Q8IXT2 367 aaPredicted RBP15.85■□□□□ 0.13
SMPD3-203ENST00000563226 JPT1Q9UK76 154 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 PKDREJQ9NTG1 2253 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 F2RL2O00254 374 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 C1QL1O75973 258 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 KRASP01116 189 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 APOC3P02656 99 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 FHITP49789 147 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 ARHGDIBP52566 201 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 ZNF134P52741 427 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 TMEM267Q0VDI3 215 aaPredicted RBP15.85■□□□□ 0.13
SMPD3-203ENST00000563226 PJVKQ0ZLH3 352 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 C17orf58Q2M2W7 97 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 UQCC3Q6UW78 93 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms