RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 G3V318 75 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 AP4M1O00189 453 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 LDLRAD4O15165 306 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 TXNL1O43396 289 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 GNB3P16520 340 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 MYL9P24844 172 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 SOX6P35712 828 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 PNLIPRP3Q17RR3 467 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-208ENST00000558827 STEAP3Q658P3 488 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF833PQ6ZTB9 187 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF554Q86TJ5 538 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 MRPL41Q8IXM3 137 aaKnown RBP9.83□□□□□ -0.84
SMAD3-208ENST00000558827 SPARTQ8N0X7 666 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 FAM71E2Q8N5Q1 922 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 WFDC9Q8NEX5 89 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 MRAPQ8TCY5 172 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 CLCC1Q96S66 551 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 NDUFB11Q9NX14 153 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF230Q9UIE0 474 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF107Q9UII5 783 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-208ENST00000558827 ELF5Q9UKW6 265 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-208ENST00000558827 RAB22AQ9UL26 194 aa9.83□□□□□ -0.84
SMAD3-208ENST00000558827 IGKV1-6A0A0C4DH72 117 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 H7C2Y5 167 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 PDCD5O14737 125 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 CT45A6P0DMU7 189 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 CT45A5P0DMU8 189 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 CT45A7P0DMV0 189 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 RAB3BP20337 219 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 KRTAP10-11P60412 298 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 TEX38Q6PEX7 206 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 NR2C2APQ86WQ0 139 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 OR56B1Q8NGI3 324 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 CASTOR1Q8WTX7 329 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 RAB3CQ96E17 227 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 KCTD7Q96MP8 289 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 OR5B12Q96R08 314 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 FBXL15Q9H469 300 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 RNF167Q9H6Y7 350 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 HSF4Q9ULV5 492 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 KCNK7Q9Y2U2 307 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 RRP15Q9Y3B9 282 aaKnown RBP9.82□□□□□ -0.84
SMAD3-208ENST00000558827 A3GALT2U3KPV4 340 aa9.82□□□□□ -0.84
SMAD3-208ENST00000558827 TRBV6-6A0A0A6YYG2 114 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 TRAV1-2A0A0B4J238 106 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 IFITM5A6NNB3 132 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 TRDCB7Z8K6 153 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 J3QRK9 145 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 FCN1O00602 326 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 RAB29O14966 203 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 BET1O15155 118 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 NBR2O15453 112 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 GSTP1P09211 210 aaKnown RBP9.81□□□□□ -0.84
SMAD3-208ENST00000558827 GSTT2P0CG29 244 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 GSTT2BP0CG30 244 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 VDAC1P21796 283 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 THBS3P49746 956 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 PSMD7P51665 324 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 GABARAPL2P60520 117 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 IGSF11Q5DX21 431 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 CXorf66Q5JRM2 361 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-208ENST00000558827 MOB1BQ7L9L4 216 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF695Q8IW36 515 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 OR8H1Q8NGG4 311 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 ABHD5Q8WTS1 349 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 RAX2Q96IS3 184 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 ATG5Q9H1Y0 275 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 OR51E2Q9H255 320 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 KLK15Q9H2R5 256 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 RIMS4Q9H426 269 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-208ENST00000558827 C12orf4Q9NQ89 552 aa9.81□□□□□ -0.84
SMAD3-208ENST00000558827 IGHV7-81A0A0B4J1V7 117 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 PROP1O75360 226 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 CLEC2LP0C7M8 214 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 ZBTB25P24278 435 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 MRPS15P82914 257 aaKnown RBP9.8□□□□□ -0.84
SMAD3-208ENST00000558827 MXD1Q05195 221 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 ARFRP1Q13795 201 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 PLGLAQ15195 96 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 ECSCRQ19T08 205 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 C5orf64Q2M2E5 130 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 UBE2UQ5VVX9 321 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 LIN54Q6MZP7 749 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 CD200R1LQ6Q8B3 271 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 OR10R2Q8NGX6 335 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 Q9H521 79 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 ZFP57Q9NU63 452 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 TXNL4BQ9NX01 149 aaKnown RBP9.8□□□□□ -0.84
SMAD3-208ENST00000558827 RDH8Q9NYR8 311 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 PIPOXQ9P0Z9 390 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 KIAA1456Q9P272 454 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 GAB2Q9UQC2 676 aa9.8□□□□□ -0.84
SMAD3-208ENST00000558827 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 WI2-2373I1.2A0A1W2PRP0 233 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms