RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ALG5Q9Y673 324 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 TRPM3Q9HCF6 1732 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 PLCH2O75038 1416 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 ZSWIM8A7E2V4 1837 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 TEX50A0A1B0GTY4 177 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 C4orf51C9J302 202 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 H3BSA7 217 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 APOEP02649 317 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 REG1AP05451 166 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 CRYBA1P05813 215 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 SERPINA6P08185 405 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 FBP1P09467 338 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 NQO1P15559 274 aaKnown RBP1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ZNF708P17019 499 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ZNF7P17097 686 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-221ENST00000556534 PRPS1L1P21108 318 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 RPL12P30050 165 aaKnown RBP1.9□□□□□ -2.11
SCFD1-221ENST00000556534 GABRA3P34903 492 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 FOXA1P55317 472 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ACTBP60709 375 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ACTG1P63261 375 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 BSPH1Q075Z2 132 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 DHRS2Q13268 280 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 BCL2A1Q16548 175 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 C10orf91Q5T1B1 145 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 OGFRL1Q5TC84 451 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ZNF660Q6AZW8 331 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-221ENST00000556534 WDR59Q6PJI9 974 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ATP5L2Q7Z4Y8 100 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 ZNF567Q8N184 647 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 NATD1Q8N6N6 113 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 TMEM161BQ8NDZ6 487 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 RAB8BQ92930 207 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 OR7D2Q96RA2 312 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 MED28Q9H204 178 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 SLC23A2Q9UGH3 650 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 HDGFL3Q9Y3E1 203 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 R4GN34 69 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 NLRC5Q86WI3 1866 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 C9orf84Q5VXU9 1444 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 SSH2Q76I76 1423 aa1.9□□□□□ -2.11
SCFD1-221ENST00000556534 SHANK3Q9BYB0 1731 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 TRBV24-1A0A075B6N3 115 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 K7EQS6 105 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 COPEO14579 308 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 IGLV3-27P01718 113 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 IGHV3-53P01767 116 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 IGHMP01871 453 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 OR12D1P0DN82 309 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 REG1BP48304 166 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 DAPP51397 102 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 HERVK_113P63121 156 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 SLC9A3R2Q15599 337 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 RGS21Q2M5E4 152 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 ZFAND6Q6FIF0 208 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 TNFAIP8L2Q6P589 184 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-221ENST00000556534 Q6ZQT7 251 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 NAA40Q86UY6 237 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 COMMD7Q86VX2 200 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 GPR32P1Q8NGA4 272 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 TMBIM1Q969X1 311 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 TESCQ96BS2 214 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 OR52B2Q96RD2 323 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 EBNA1BP2Q99848 306 aaKnown RBP1.89□□□□□ -2.11
SCFD1-221ENST00000556534 XPNPEP1Q9NQW7 623 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 CRB1P82279 1406 aa1.89□□□□□ -2.11
SCFD1-221ENST00000556534 SNAPC4Q5SXM2 1469 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 DSCAMO60469 2012 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 COL18A1P39060 1754 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.88□□□□□ -2.11
SCFD1-221ENST00000556534 C15orf65H3BRN8 121 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 MRASO14807 208 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 SH2D1AO60880 128 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 ISG15P05161 165 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 CALB1P05937 261 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 GUSBP08236 651 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 CD36P16671 472 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 CDK2P24941 298 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 OR1E2P47887 323 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 AP2S1P53680 142 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-221ENST00000556534 RPS24P62847 133 aaKnown RBP1.88□□□□□ -2.11
SCFD1-221ENST00000556534 CTAG1AP78358 180 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 TSPAN31Q12999 210 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 OR8G1Q15617 311 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 MAPK14Q16539 360 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 DEFB134Q4QY38 66 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 C1orf195Q5TG92 126 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 NIT1Q86X76 327 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 HS3ST5Q8IZT8 346 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 ZFAND2AQ8N6M9 145 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 Q8NAQ8 132 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 BPIFB6Q8NFQ5 453 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 CD200R1Q8TD46 325 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 ITFG2Q969R8 447 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 OTUB2Q96DC9 234 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 TRIB3Q96RU7 358 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 MED18Q9BUE0 208 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 BCL2L14Q9BZR8 327 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms