RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 OR9Q1Q8NGQ5 310 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 OR4K13Q8NH42 304 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 FANK1Q8TC84 345 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 GIPC3Q8TF64 312 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 C10orf82Q8WW14 230 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 SPRYD4Q8WW59 207 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-219ENST00000556413 SAMD8Q96LT4 415 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF317Q96PQ6 595 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-219ENST00000556413 GAFA1Q96PS6 74 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF649Q9BS31 505 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM43Q9BTV4 400 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 TXNIPQ9H3M7 391 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 ARMC7Q9H6L4 198 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 SIAEQ9HAT2 523 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 RPRD1BQ9NQG5 326 aaKnown RBP1.8□□□□□ -2.12
SCFD1-219ENST00000556413 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 IL19Q9UHD0 177 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 LINC00527Q9UJ94 153 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF391Q9UJN7 358 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF229Q9UJW7 825 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 NDUFAF1Q9Y375 327 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 TIMM10BQ9Y5J6 103 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 IER3IP1Q9Y5U9 82 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 LHFPL6Q9Y693 200 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 WNK1Q9H4A3 2382 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 HECTD4Q9Y4D8 3996 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
SCFD1-219ENST00000556413 NUP214P35658 2090 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 HEATR1Q9H583 2144 aaKnown RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PPIAL4CA0A0B4J2A2 164 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 LOC102725191A0A1B0GVB3 256 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PRSS37A4D1T9 235 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PRORSD1PA6NEY8 169 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OR6C6A6NF89 314 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 A6NIN4 97 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 TRPC5OSA6NMA1 111 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 CD300LBA8K4G0 201 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF850A8MQ14 1090 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 C12orf71A8MTZ7 269 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 IQCF6A8MYZ5 107 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 EVPLLA8MZ36 301 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 H3BMQ9 156 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 M0R129 80 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FXYD1O00168 92 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 XKRYO14609 159 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 CDIPTO14735 213 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PHYHO14832 338 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FFAR1O14842 300 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 ANGPT2O15123 496 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 POLR3GO15318 223 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 BIRC5O15392 142 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 AKR7A2O43488 359 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 SSX5O60225 188 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 SERPINB7O75635 380 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OR5F1O95221 314 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 SOX14O95416 240 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PTBP3O95758 552 aaKnown RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PTHP01270 115 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 IGHV3-7P01780 117 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FBP1P09467 338 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 TSPAN19P0C672 248 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 ACSM4P0C7M7 580 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PPIAL4GP0DN37 164 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 TROVE2P10155 538 aaKnown RBP eCLIP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 CLUP10909 449 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 ETS2P15036 469 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 H2AFXP16104 143 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 HIST1H1CP16403 213 aaKnown RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FKBP2P26885 142 aaKnown RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 GABRA2P47869 451 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 SRP9P49458 86 aaKnown RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 GZMMP51124 257 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 EFNB2P52799 333 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FXYD6P3P58550 94 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 BLCAPP62952 87 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 SCRN3Q0VDG4 424 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 EDDM3AQ14507 147 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 MOGQ16653 247 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 RSPO1Q2MKA7 263 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 DEFB136Q30KP8 78 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 KPRPQ5T749 579 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FAM27BQ5VT28 67 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 EPGNQ6UW88 154 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 C5orf46Q6UWT4 87 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PGAP1Q75T13 922 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 FAM122BQ7Z309 247 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OAFQ86UD1 273 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 CALHM3Q86XJ0 350 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 MTURNQ8N3F0 131 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 TEX29Q8N6K0 151 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 SLC26A10Q8NG04 563 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OR51G2Q8NGK0 314 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OR4C13Q8NGP0 309 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OR11L1Q8NGX0 322 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 OR8S1Q8NH09 359 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 IL1F10Q8WWZ1 152 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 DEDD2Q8WXF8 326 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 TNFRSF14Q92956 283 aa1.79□□□□□ -2.12
SCFD1-219ENST00000556413 DUS3LQ96G46 650 aaKnown RBP1.79□□□□□ -2.12
SCFD1-219ENST00000556413 PLEKHA8Q96JA3 519 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms