RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 LAX1Q8IWV1 398 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 ORAI1Q96D31 301 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 WDR89Q96FK6 387 aaPredicted RBP9.67□□□□□ -0.86
VPS29-211ENST00000553128 CPNE2Q96FN4 548 aaPredicted RBP9.67□□□□□ -0.86
VPS29-211ENST00000553128 RIBC2Q9H4K1 309 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
VPS29-211ENST00000553128 MCRIP1C9JLW8 97 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 MAS1P04201 325 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 GSTP1P09211 210 aaKnown RBP9.66□□□□□ -0.86
VPS29-211ENST00000553128 LINC00205P59089 165 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 TMED1Q13445 227 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 FXYD3Q14802 87 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 RAB12Q6IQ22 244 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 BVESQ8NE79 360 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 OR5AK2Q8NH90 309 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 CIB1Q99828 191 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 GGTLC1Q9BX51 225 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 RAB9BQ9NP90 201 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 MBNL3Q9NUK0 354 aaKnown RBP9.66□□□□□ -0.86
VPS29-211ENST00000553128 JPT1Q9UK76 154 aa9.66□□□□□ -0.86
VPS29-211ENST00000553128 UBE2QL1A1L167 161 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 MSGN1A6NI15 193 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 H3BUA1 57 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 H7C2Y5 167 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 BMPR1BO00238 502 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 YPEL1O60688 119 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 T-ENOLP0DO92 83 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 ZNF93P35789 620 aaPredicted RBP9.65□□□□□ -0.86
VPS29-211ENST00000553128 PJVKQ0ZLH3 352 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 TATDN3Q17R31 274 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 DDI2Q5TDH0 399 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 DMKNQ6E0U4 476 aaPredicted RBP9.65□□□□□ -0.86
VPS29-211ENST00000553128 LHFPL3Q86UP9 236 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 OR8J1Q8NGP2 316 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 MRPL30Q8TCC3 161 aaKnown RBP9.65□□□□□ -0.86
VPS29-211ENST00000553128 RFKQ969G6 155 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 NSL1Q96IY1 281 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 YPEL2Q96QA6 119 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 THTPAQ9BU02 230 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 JAM3Q9BX67 310 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 TINAGL1Q9GZM7 467 aaPredicted RBP9.65□□□□□ -0.86
VPS29-211ENST00000553128 ZC4H2Q9NQZ6 224 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 PEMTQ9UBM1 199 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 ARL2BPQ9Y2Y0 163 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 PEX16Q9Y5Y5 336 aa9.65□□□□□ -0.86
VPS29-211ENST00000553128 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 TCRBV3S1A0A5B6 114 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 OR5H14A6NHG9 310 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 TMEM212A6NML5 194 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 H3BNX3 289 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 SLC22A1O15245 554 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 SC5DO75845 299 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 IGKV1-16P04430 117 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 APELAP0DMC3 54 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 GTF2F2P13984 249 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 HTD2P86397 168 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 RIPK1Q13546 671 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 ACBD7Q8N6N7 88 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 DRAXINQ8NBI3 349 aaPredicted RBP9.64□□□□□ -0.87
VPS29-211ENST00000553128 OR2AK2Q8NG84 335 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
VPS29-211ENST00000553128 KCTD12Q96CX2 325 aaKnown RBP9.64□□□□□ -0.87
VPS29-211ENST00000553128 ABHD14BQ96IU4 210 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 WASHC3Q9Y3C0 194 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
VPS29-211ENST00000553128 LOC102724200A0A096LPH7 203 aaPredicted RBP9.63□□□□□ -0.87
VPS29-211ENST00000553128 G3V2T6 193 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 DCTN3O75935 186 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 RPSAP08865 295 aaKnown RBP9.63□□□□□ -0.87
VPS29-211ENST00000553128 MED14OSP0DP75 135 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 AADACP22760 399 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 GTF2A1P52655 376 aaPredicted RBP9.63□□□□□ -0.87
VPS29-211ENST00000553128 LY6G6FQ5SQ64 297 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 SIGIRRQ6IA17 410 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 FAM71F2Q6NXP2 309 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 WFDC3Q8IUB2 231 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 OR5AN1Q8NGI8 311 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 GHSRQ92847 366 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 S100A13Q99584 98 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 ALG8Q9BVK2 526 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 SPACA1Q9HBV2 294 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 AASSQ9UDR5 926 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 HERC1Q15751 4861 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 MUC4Q99102 2169 aa9.63□□□□□ -0.87
VPS29-211ENST00000553128 FAM90A23PA8MXZ1 464 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 AIREO43918 545 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 PROP1O75360 226 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 RBBP9O75884 186 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 NDUFB8O95169 186 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 BAG2O95816 211 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 FOLR2P14207 255 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 HOXB6P17509 224 aaKnown RBP9.62□□□□□ -0.87
VPS29-211ENST00000553128 KIR2DS2P43631 304 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 FLOT2Q14254 428 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 DEFB135Q30KP9 77 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 SNAPC3Q92966 411 aa9.62□□□□□ -0.87
VPS29-211ENST00000553128 LGALS12Q96DT0 336 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms