RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LHX2P50458 406 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 CCR6P51684 374 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 MNAT1P51948 309 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 WNT4P56705 351 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 CCL7P80098 99 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 GLO1Q04760 184 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 PAFAH1B3Q15102 231 aaKnown RBP2.88□□□□□ -1.95
SCAF11-210ENST00000547654 PDK2Q15119 407 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 LRRC26Q2I0M4 334 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 Q6ZR54 194 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 SLC51BQ86UW2 128 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 COMMD7Q86VX2 200 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 SLC25A45Q8N413 288 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 RNF175Q8N4F7 328 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 C11orf42Q8N5U0 333 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 SLC25A29Q8N8R3 303 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 Q8N976 141 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 OR4K5Q8NGD3 323 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 OR5B17Q8NGF7 314 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 OR5H2Q8NGV7 314 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 SRSF12Q8WXF0 261 aaKnown RBP2.88□□□□□ -1.95
SCAF11-210ENST00000547654 TLCD1Q96CP7 247 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 TIPINQ9BVW5 301 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 C12orf10Q9HB07 376 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 KLF13Q9Y2Y9 288 aaPredicted RBP2.88□□□□□ -1.95
SCAF11-210ENST00000547654 LSM5Q9Y4Y9 91 aaKnown RBP2.88□□□□□ -1.95
SCAF11-210ENST00000547654 ALG5Q9Y673 324 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 DOPEY1Q5JWR5 2465 aa2.88□□□□□ -1.95
SCAF11-210ENST00000547654 RIC1Q4ADV7 1423 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 IGLV3-10A0A075B6K4 115 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 IGHV3-49A0A0A0MS15 119 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 IGHV7-4-1A0A0J9YVY3 117 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 TMEM223A0PJW6 202 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 LGALS9O00182 355 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 SOCS1O15524 211 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 EPPINO95925 133 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 IGLV2-8P01709 118 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 HIST1H1EP10412 219 aaKnown RBP2.87□□□□□ -1.95
SCAF11-210ENST00000547654 HSPA13P48723 471 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 GDI2P50395 445 aaKnown RBP2.87□□□□□ -1.95
SCAF11-210ENST00000547654 IDH3GP51553 393 aaPredicted RBP2.87□□□□□ -1.95
SCAF11-210ENST00000547654 TSPAN31Q12999 210 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ELOCQ15369 112 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF684Q5T5D7 378 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 SYPL2Q5VXT5 272 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 FA2HQ7L5A8 372 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF584Q8IVC4 421 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ITPRIPQ8IWB1 547 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 OR11L1Q8NGX0 322 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 OR5W2Q8NH69 310 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 OR5K1Q8NHB7 308 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 HAVCR2Q8TDQ0 301 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 OPTNQ96CV9 577 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 PPP1R36Q96LQ0 422 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 RNF157Q96PX1 679 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 TBL1YQ9BQ87 522 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 SELENOSQ9BQE4 189 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 PRSS27Q9BQR3 290 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ULBP1Q9BZM6 244 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 PLEKHF2Q9H8W4 249 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 PARVAQ9NVD7 372 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ENOPH1Q9UHY7 261 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF222Q9UK12 451 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 C14orf166Q9Y224 244 aaKnown RBP2.87□□□□□ -1.95
SCAF11-210ENST00000547654 POMPQ9Y244 141 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 TMEM14AQ9Y6G1 99 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 ITPR1Q14643 2758 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 SCN9AQ15858 1988 aa2.87□□□□□ -1.95
SCAF11-210ENST00000547654 COL4A1P02462 1669 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 RELNP78509 3460 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TECTAO75443 2155 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TRBV6-6A0A0A6YYG2 114 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 IGHV2-26A0A0B4J1V2 119 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 IGHV3-72A0A0B4J1Y9 119 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 C5orf63A6NC05 138 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 C8orf87E5RJ46 101 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 H0YJW9 148 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 MFNGO00587 321 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TCRBP04435 133 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SOD3P08294 240 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 IL3P08700 152 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF806P0C7X5 589 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TLX1NBP0CAT3 122 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 PSG2P11465 335 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 MYL12AP19105 171 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 KIR3DL2P43630 455 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SULT1A2P50226 295 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 OR4D2P58180 307 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 TAS2R43P59537 309 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 LSM6P62312 80 aaKnown RBP2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ARF6P62330 175 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ESRRGP62508 458 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SLC35A2P78381 396 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 ATP5G2Q06055 141 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 FMODQ06828 376 aa2.86□□□□□ -1.95
SCAF11-210ENST00000547654 SRSF6Q13247 344 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms