RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SLC23A1Q9UHI7 598 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 TPRKBQ9Y3C4 175 aa11.22□□□□□ -0.61
COL2A1-209ENST00000546974 SORL1Q92673 2214 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 G3V318 75 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 IGLV1-40P01703 118 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 ARSBP15848 533 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 KIAA0141Q14154 515 aaPredicted RBP11.21□□□□□ -0.61
COL2A1-209ENST00000546974 C11orf87Q6NUJ2 197 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 TMEM65Q6PI78 240 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 TMEM91Q6ZNR0 172 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 ZNF491Q8N8L2 437 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 OR11H1Q8NG94 326 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 SETD6Q8TBK2 473 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 TMEM203Q969S6 136 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 KLK15Q9H2R5 256 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 DUSP21Q9H596 190 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 NKX1-2Q9UD57 310 aaPredicted RBP11.21□□□□□ -0.61
COL2A1-209ENST00000546974 MGAT4AQ9UM21 535 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
COL2A1-209ENST00000546974 HUWE1Q7Z6Z7 4374 aaKnown RBP11.21□□□□□ -0.62
COL2A1-209ENST00000546974 TRAV41A0A0B4J266 112 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 ANKRD65E5RJM6 399 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 I3L521 148 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 SLC17A2O00624 439 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 SOCS1O15524 211 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 CT45A6P0DMU7 189 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 CT45A5P0DMU8 189 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 CT45A7P0DMV0 189 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 PSMA1P25786 263 aaKnown RBP11.2□□□□□ -0.62
COL2A1-209ENST00000546974 LUMP51884 338 aaPredicted RBP11.2□□□□□ -0.62
COL2A1-209ENST00000546974 AQP4P55087 323 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 RUNX1Q01196 453 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 GFI1Q99684 422 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 GNB4Q9HAV0 340 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 PLGRKTQ9HBL7 147 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 AK3Q9UIJ7 227 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 HSF4Q9ULV5 492 aa11.2□□□□□ -0.62
COL2A1-209ENST00000546974 AK6Q9Y3D8 172 aaKnown RBP11.2□□□□□ -0.62
COL2A1-209ENST00000546974 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
COL2A1-209ENST00000546974 RGS10O43665 173 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 ARL6IP5O75915 188 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 HSMCR30P0CW71 290 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 MC5RP33032 325 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 RANBP1P43487 201 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 RAB9AP51151 201 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 TMEM50BP56557 158 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 RPS25P62851 125 aaKnown RBP11.19□□□□□ -0.62
COL2A1-209ENST00000546974 HLA-DRB3P79483 266 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 MLLT11Q13015 90 aaPredicted RBP11.19□□□□□ -0.62
COL2A1-209ENST00000546974 P2RY14Q15391 338 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 ZNF660Q6AZW8 331 aaPredicted RBP11.19□□□□□ -0.62
COL2A1-209ENST00000546974 FAM131AQ6UXB0 335 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 MINDY2Q8NBR6 621 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 EDARADDQ8WWZ3 215 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 RNF5Q99942 180 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 AGMATQ9BSE5 352 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 TENM3Q9P273 2699 aa11.19□□□□□ -0.62
COL2A1-209ENST00000546974 H0YJW9 148 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 RRHO14718 337 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 RBBP9O75884 186 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 OR8U8P0C7N1 319 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 CPEP16870 476 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 ZBTB25P24278 435 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 CEACAM6P40199 344 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 CRIP2P52943 208 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-209ENST00000546974 ZNF616Q08AN1 781 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 RAB11BQ15907 218 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 C19orf54Q5BKX5 351 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 TCTEX1D1Q8N7M0 179 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 OR1N2Q8NGR9 330 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 NRG4Q8WWG1 115 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 PTX4Q96A99 478 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 ABHD14BQ96IU4 210 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-209ENST00000546974 PARP12Q9H0J9 701 aaKnown RBP11.18□□□□□ -0.62
COL2A1-209ENST00000546974 C11orf54Q9H0W9 315 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-209ENST00000546974 Q9N2K0 584 aa11.18□□□□□ -0.62
COL2A1-209ENST00000546974 LSM4Q9Y4Z0 139 aaKnown RBP11.18□□□□□ -0.62
COL2A1-209ENST00000546974 HSPA12AO43301 675 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
COL2A1-209ENST00000546974 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
COL2A1-209ENST00000546974 ECI1P42126 302 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 VEGFCP49767 419 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 INSL3P51460 131 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 PSMD7P51665 324 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 GNB1P62873 340 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 CX3CL1P78423 397 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 NDPQ00604 133 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 PLGLAQ15195 96 aa11.17□□□□□ -0.62
COL2A1-209ENST00000546974 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms