RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 NPFFR1Q9GZQ6 430 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 TMEM126AQ9H061 195 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 KIF26AQ9ULI4 1882 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-212ENST00000543766 CKAP5Q14008 2032 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 H3BS24 57 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 CA2P00918 260 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 PPIBP23284 216 aaKnown RBP7.62□□□□□ -1.19
VPS13D-212ENST00000543766 INSL4Q14641 139 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF260Q3ZCT1 412 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF550Q7Z398 422 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-212ENST00000543766 ZADH2Q8N4Q0 377 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 RTN4IP1Q8WWV3 396 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-212ENST00000543766 CST11Q9H112 138 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 SLC35B3Q9H1N7 401 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 FRMPD3Q5JV73 1810 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 PRSS29PA6NIE9 313 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 LRRC30A6NM36 301 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 FFAR1O14842 300 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 GAGE2BQ13066 116 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 RTP5Q14D33 572 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 C2orf68Q2NKX9 166 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 OR10D3Q8NH80 312 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 TMEM100Q9NV29 134 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 HKR1P10072 659 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 SLC35B1P78383 322 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 ADIGQ0VDE8 80 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 PRSS8Q16651 343 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 RPL7L1Q6DKI1 246 aaKnown RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 SBSNQ6UWP8 590 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 RSPO2Q6UXX9 243 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 MARCH9Q86YJ5 346 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 GNG12Q9UBI6 72 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 TRAV14DV4A0A0A6YYC5 116 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 A0A1W2PP55 124 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF354AO60765 605 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 PAGE4O60829 102 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 RAMP2O60895 175 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 MT-ND6P03923 174 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 LGALS2P05162 132 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 IGLC2P0DOY2 106 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 IGLC3P0DOY3 106 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 CLDN15P56746 228 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF816Q0VGE8 651 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF750Q32MQ0 723 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 APOOLQ6UXV4 268 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 PAQR9Q6ZVX9 377 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 SLC25A26Q70HW3 274 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 BAGE3Q86Y29 109 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 BAGE2Q86Y30 109 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 SYT8Q8NBV8 401 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 OR5K2Q8NHB8 316 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 SMIM4Q8WVI0 70 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 OR5P3Q8WZ94 311 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 PNRC2Q9NPJ4 139 aaKnown RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 NAT8BQ9UHF3 227 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 PRNDQ9UKY0 176 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 HLA-DPB1P04440 258 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 PRSS56P0CW18 603 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 FOLR1P15328 257 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 FAM166AQ6J272 317 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 MRPL54Q6P161 138 aaKnown RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 Q71RC1 249 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 TMPRSS12Q86WS5 348 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 TMEM25Q86YD3 366 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 SIGLECL1Q8N7X8 197 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 CDX2Q99626 313 aaPredicted RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 NMNAT2Q9BZQ4 307 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 TECRQ9NZ01 308 aaKnown RBP7.61□□□□□ -1.19
VPS13D-212ENST00000543766 TMED7Q9Y3B3 224 aa7.61□□□□□ -1.19
VPS13D-212ENST00000543766 MED19A0JLT2 244 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 EEF1E1-BLOC1S5C9J1V9 151 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 NDUFS4O43181 175 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 SPRY2O43597 315 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 CATP04040 527 aaKnown RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 OPRM1P35372 400 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 SLC25A35Q3KQZ1 300 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 STPG3Q8N7X2 389 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 OR5AU1Q8NGC0 362 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 GPR21Q99679 349 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 NOP16Q9Y3C1 178 aaKnown RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 ENTPD2Q9Y5L3 495 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 PRUNE2Q8WUY3 3088 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 MPDZO75970 2070 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 PRSS38A1L453 326 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 J3QRE1 110 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 FAUP35544 74 aaKnown RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 PCBP3P57721 371 aaKnown RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 MRPS6P82932 125 aaKnown RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF345Q14585 488 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 PRSS45Q7RTY3 260 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 CXorf67Q86X51 503 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-212ENST00000543766 GJC3Q8NFK1 279 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 OR13H1Q8NG92 308 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 RPEQ96AT9 228 aa7.6□□□□□ -1.19
VPS13D-212ENST00000543766 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms