RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 MNTQ99583 582 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 SLC23A1Q9UHI7 598 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 ADAM30Q9UKF2 790 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 FOXA2Q9Y261 457 aaPredicted RBP6.93□□□□□ -1.3
USP28-205ENST00000537706 A0A0U1RQV5 110 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 A0A1W2PN81 502 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 ODAMA1E959 279 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 SMIM30A4D0T7 59 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 ACOD1A6NK06 481 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 ATP6V0E1O15342 81 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 CYB5AP00167 134 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 CSTBP04080 98 aaKnown RBP6.92□□□□□ -1.3
USP28-205ENST00000537706 HNRNPCP07910 306 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP28-205ENST00000537706 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
USP28-205ENST00000537706 CHRNA7P36544 502 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 OR3A1P47881 315 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 GNG10P50151 68 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 PSMA6P60900 246 aaKnown RBP6.92□□□□□ -1.3
USP28-205ENST00000537706 EWSR1Q01844 656 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP28-205ENST00000537706 MOGAT2Q3SYC2 334 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 FAM131AQ6UXB0 335 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 SLC16A13Q7RTY0 426 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 RDH10Q8IZV5 341 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 GHSRQ92847 366 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
USP28-205ENST00000537706 DIRAS2Q96HU8 199 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 TTTY10Q9BZA0 68 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 PLSCR3Q9NRY6 295 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 GPR173Q9NS66 373 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 IDI2-AS1Q9NZ38 188 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 PEMTQ9UBM1 199 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 GNG8Q9UK08 70 aa6.92□□□□□ -1.3
USP28-205ENST00000537706 TRAV1-2A0A0B4J238 106 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 KBTBD11-OT1A0A1B0GTJ5 212 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 FABP12A6NFH5 140 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 SH2D1BO14796 132 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 GATBO75879 557 aaKnown RBP6.91□□□□□ -1.3
USP28-205ENST00000537706 APOA1P02647 267 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 IL7P13232 177 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 HCCSP53701 268 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 TMEM267Q0VDI3 215 aaPredicted RBP6.91□□□□□ -1.3
USP28-205ENST00000537706 DIAPH2-AS1Q14236 149 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 ECSCRQ19T08 205 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 SPIN3Q5JUX0 258 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 FAM220AQ7Z4H9 259 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 KCTD20Q7Z5Y7 419 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 CEACAM19Q7Z692 300 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 NR2C2APQ86WQ0 139 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 PHYHIPQ92561 330 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 SLAMF9Q96A28 289 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 KIRREL1Q96J84 757 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 FBXL17Q9UF56 701 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 RNF150Q9ULK6 438 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 TBC1D24Q9ULP9 559 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 PSG11Q9UQ72 335 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 RTL8CO15255 209 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 TXNL1O43396 289 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 ARL6IP5O75915 188 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 HLA-DQB1P01920 261 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 UCHL1P09936 223 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 RANBP1P43487 201 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 REG1BP48304 166 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 APOC4P55056 127 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 TPPP2P59282 170 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 ASAH1Q13510 395 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 MMDQ15546 238 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 GUCA2BQ16661 112 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 KRBOX4Q5JUW0 171 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 SFXN4Q6P4A7 337 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 CNIH2Q6PI25 160 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 ZNF565Q8N9K5 539 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 DYNLRB2Q8TF09 96 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 SOSTQ9BQB4 213 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 PPIL3Q9H2H8 161 aaKnown RBP6.91□□□□□ -1.3
USP28-205ENST00000537706 ZNF355PQ9NSJ1 428 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 MBNL3Q9NUK0 354 aaKnown RBP6.91□□□□□ -1.3
USP28-205ENST00000537706 COMMD3Q9UBI1 195 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 TMEM14AQ9Y6G1 99 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 TNCP24821 2201 aa6.91□□□□□ -1.3
USP28-205ENST00000537706 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
USP28-205ENST00000537706 TRBV2A0A0J9YWF9 115 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 C13orf42A0A1B0GVH6 325 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 PRR32B1ATL7 298 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 SIRPB1O00241 398 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 HPGDSO60760 199 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 CD7P09564 240 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 SLC2A2P11168 524 aaPredicted RBP6.9□□□□□ -1.3
USP28-205ENST00000537706 GLP1RP43220 463 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 RPS11P62280 158 aaKnown RBP eCLIP6.9□□□□□ -1.3
USP28-205ENST00000537706 SCN1BQ07699 218 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 AESQ08117 197 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 ACSM3Q53FZ2 586 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 YIF1BQ5BJH7 314 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 CADM3Q8N126 398 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 RHOVQ96L33 236 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 SLA2Q9H6Q3 261 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 KLHDC2Q9Y2U9 406 aa6.9□□□□□ -1.3
USP28-205ENST00000537706 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms